| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0517 |
|---|
| Symbol | glmS |
|---|
| ID | 3690225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 522984 |
|---|
| End bp | 524816 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637726973 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_331931 |
|---|
| Protein GI | 76808745 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.698391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGGA TTGTCGGCGC AGTTGCGCAA CGTAACATCG TTCCGGTGCT GATCGAAGGG
CTGCGCCGTC TCGAGTATCG CGGCTACGAC TCATGCGGCG TCGCGGTGCT CGACGCCGGC
GCCCCCGCGC CGGGCACGCC CAAGCGCGCG CGCAGCGTCG CGCGGGTGGC CGATCTCGAC
GCGCAGGTGC GCGAATCGCA TCTCGAAGGC GAGACGGGCA TCGCGCACAC GCGCTGGGCG
ACGCACGGCG CGCCCGTCAC GCACAACGCG CATCCGATCT TCTCGTCGGA CGCGCTCGCG
CTCGTGCACA ACGGCATCAT CGAGAACTTC GAGCCGCTGC GCGAAGCGCT GCGCGCGAAG
GGTTACGCAT TCGTGTCGCA GACCGACACC GAGGTCATCG CTCACCTGAT CCACAGCCTC
TATCGCGGCA ACCTGTTCGC GGCCGTTCAG CAAGCCGTCA AGCAACTGCA CGGCGCCTAC
GCGATCGCGG TGACCCACAA GGACGAGCCG CATACCGTCG TCGGGGCGCG CCAGGGCTCG
CCGCTCGTCG TCGGTTTCGG CGAGCGCGAG AATTTCCTCG CGTCCGACGC GCTCGCGCTC
GCCGGCAGCA CCGATCGCTT CACGTTCCTC GAGGAAGGCG ACGTCTGCGA GCTCAAGCTC
GAAGGCGTGA CTGTCGTCGA TCGCGACGGC GCGCGCGCCG CGCGCGACGT GCGCGTCGTC
GCCGCATACG GCGGCGCGGT CGAGCTCGGC CCGTACCGGC ATTTCATGCA GAAGGAGATC
TTCGAGCAGC CGCGCGCGAT CGCCGACACG ATTGCGCAAA CGGACGCGTT CGATCCGCCG
CTGTTCGGCG AGCGCGCGAG CAGCGTGTTC GCGGGCATCG ACAGCCTGCT GATCCTCGCA
TGCGGCACGA GCTACTACTC GGGCCTCACC GCGAAATACT GGCTCGAATC GATCGCGAAG
ATCCCGACGC AGGTCGAGAT CGCGAGCGAA TACCGCTACC GCGAATCGGT GCCGAACCCG
CGCGCGCTCG TCGTCGTGAT CTCGCAATCG GGCGAGACGG CCGATACGCT CGCCGCGCTC
AAGCACGCGC AGGCGCTCGG CCATGCGCAC ACGCTCGCGA TCTGCAACGT CGCGACGAGC
GCGATGGTGC GCCAGACCGA GCTGCAATTC CTCACGCACG CGGGCACCGA GATCGGCGTC
GCGTCGACGA AGGCGTTCAC GACGCAGCTC GTCGCGCTGT TCGTGCTCGC GGCGACGCTC
GGCAAGCTGC GCGGCCACGT CGATGCGGCT CGCGAAGCCG ATTACCTGAA GCAACTGCGC
CACCTGCCCG CCGCGCTCAA CAGCGTGCTC GCGCTCGAGC CGCAGATCAT CGCGTGGTCC
GACGAGTTCG CGCGCAAGGA AAACGCGCTG TTCCTCGGCC GCGGGCTGCA CTATCCGATC
TCGCTCGAAG GCGCGCTGAA GCTCAAGGAG ATCTCGTACA TCCACGCGGA AGCGTACCCG
GCGGGCGAAC TGAAGCACGG ACCGCTCGCG CTCGTGACGG AGGCGATGCC GGTCGTGACG
GTCGCGCCGA ACGACACGCT GCTCGAGAAG CTGAAGTCGA ACATGCAGGA GGTGCGCGCG
CGCGGCGGCG AACTGTACGT GTTCGCCGAC GCGGACACGC ACATCGTCAA CGACGAAGGG
CTGCACGTGA TCCGCATGCC CGAGCATTAC GGGCCGCTGT CGCCGATCCT GCACGTCGTG
CCGCTGCAAC TGCTCGCGTA TCACACCGCC TGCGCACGCG GCACCGATGT CGACAAGCCG
CGCAATCTCG CGAAATCGGT GACGGTGGAA TAA
|
|---|
| Protein sequence | MCGIVGAVAQ RNIVPVLIEG LRRLEYRGYD SCGVAVLDAG APAPGTPKRA RSVARVADLD
AQVRESHLEG ETGIAHTRWA THGAPVTHNA HPIFSSDALA LVHNGIIENF EPLREALRAK
GYAFVSQTDT EVIAHLIHSL YRGNLFAAVQ QAVKQLHGAY AIAVTHKDEP HTVVGARQGS
PLVVGFGERE NFLASDALAL AGSTDRFTFL EEGDVCELKL EGVTVVDRDG ARAARDVRVV
AAYGGAVELG PYRHFMQKEI FEQPRAIADT IAQTDAFDPP LFGERASSVF AGIDSLLILA
CGTSYYSGLT AKYWLESIAK IPTQVEIASE YRYRESVPNP RALVVVISQS GETADTLAAL
KHAQALGHAH TLAICNVATS AMVRQTELQF LTHAGTEIGV ASTKAFTTQL VALFVLAATL
GKLRGHVDAA READYLKQLR HLPAALNSVL ALEPQIIAWS DEFARKENAL FLGRGLHYPI
SLEGALKLKE ISYIHAEAYP AGELKHGPLA LVTEAMPVVT VAPNDTLLEK LKSNMQEVRA
RGGELYVFAD ADTHIVNDEG LHVIRMPEHY GPLSPILHVV PLQLLAYHTA CARGTDVDKP
RNLAKSVTVE
|
|---|
| |