| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0512 |
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| Symbol | silC |
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| ID | 3688241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 515832 |
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| End bp | 517133 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637726968 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_331926 |
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| Protein GI | 76810015 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCGA TGCTTCGCGC GCCGCACGGC CGGCGTGCGC GCCTGCACGC GCGCACGCTC
GTCGCGGCGC TCACTTTCGC GAACGCCGCC GCCGCGTTCG CCCAATCGGC GCCGCTCACG
CTCGACGCCG CGCTGCAATC GGCCGCCGAC CGATCGGCGG CGATGCAGGC GGCGCAGGCG
TCCGTCCAGG CGAGCGCCGA GCTCGCCGTC AAGGCCGGGC AATTGCCCGA TCCGATGCTG
AAGGCCGGCA TCGACAATCT GCCCGTCGAC GGCCCGCAAC GCTTCACGAT CGGCCAGGAA
TCGATGACGA TGCGCCGCAT CGGCATCGCG CAGGAGTGGG TGTCGGGCGA CAAGCGCCGG
CTGCGCACCG CGCTCGCGAA CGAAGTCGTC GGCCGCGAAC GCGCCGGCTA TCTCGCGCAA
CTCGCGGACG TTCGCCGGCA GACGGCCATC GCGTGGCTTG ACGCCGCATA CGCGAAGAAG
GCGCTCGCGC TGCAGCGCGA ACTCGCCGAC GAGATGAACC GCGAGCTCGC CGCGACGCAG
GCCGCGTATC GCGGCGCGAA GGCGACGGCC GCCGACGCCC TGCAGGCGCG CGCGCTGCTC
GCGCAGGCGC GCGACCGGCA AGCGAACGCC CGCCAGGCGT TCGACACCGC GCTGATCGGC
CTGTCTCGCT GGGTTGCCGC GCCGACACTC GACGTGGCGG GCGAGCCGCC CGCGCCGGTG
TCGTTCGTGC CGTCGCTGCC GCCCGACGAG CTGCGCCGTG TGCAGCCGAC GCTGATCGCG
GCCGACGAGG ACGTGGAGGT GGCCGACGCC GACGTCGCGC TCGCCGCGAG CGAGCGGCGT
CCGAACTGGA CGTGGGAGAT CGCGTATCAG CAGCGCGGCG CGCCGTACGC GAACATGGTG
TCGATCGGCG TCACGATTCC GCTGCCGCTC GATCGGCGCG ATCGGCAGGA CCGCGACGTC
GCGCAAAAGC GCGCGCTCGC CACGAAGGCG CGGCTGATGT ACGAGGATGC GCGGCGTCAG
GTCGACGCGG ATATCCGCAC GCAATCGGCG ACGCTCGAGA GCGGCCGCGC GCGGCTCGCG
GAGCTCGGGC GAGCGCTGCT GCCCGCGGCC GACGAGCGCG TGCGCCTTGC CGACGCCGCG
TACCGCGCGG GCGCGGGCTC GCTCGCCGAC GCGTTCGCCG CGCGTCGCGC GCGGCTCGAT
GCGCGGCTCC AGGTGCTCGA TCTCGAACGC GACGTCGCGC GAGCGTGGGC GCAGCTCGAC
TATCAGATCG TCCCGTCGGC GATGCTCGCC GCCGCACAGT GA
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| Protein sequence | MYSMLRAPHG RRARLHARTL VAALTFANAA AAFAQSAPLT LDAALQSAAD RSAAMQAAQA
SVQASAELAV KAGQLPDPML KAGIDNLPVD GPQRFTIGQE SMTMRRIGIA QEWVSGDKRR
LRTALANEVV GRERAGYLAQ LADVRRQTAI AWLDAAYAKK ALALQRELAD EMNRELAATQ
AAYRGAKATA ADALQARALL AQARDRQANA RQAFDTALIG LSRWVAAPTL DVAGEPPAPV
SFVPSLPPDE LRRVQPTLIA ADEDVEVADA DVALAASERR PNWTWEIAYQ QRGAPYANMV
SIGVTIPLPL DRRDRQDRDV AQKRALATKA RLMYEDARRQ VDADIRTQSA TLESGRARLA
ELGRALLPAA DERVRLADAA YRAGAGSLAD AFAARRARLD ARLQVLDLER DVARAWAQLD
YQIVPSAMLA AAQ
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