| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0439 |
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| Symbol | dppC |
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| ID | 3691549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 452623 |
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| End bp | 453540 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637726895 |
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| Product | dipeptide transport system permease protein |
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| Protein accession | YP_331853 |
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| Protein GI | 76809007 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.760641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA TGCAAAACGC CATGCCGTCG CAGGCGGCGC CCGCAAGCGG GCGCGTGCTC
GCGCTGCGCG AATTCTGGGC GAATTTCTCC CGCAACCGCG GCGCGGTCGG CGCCGGCATC
GTCGTGCTCG CGCTGGTGGC CGTCGCGCTC CTCGCGCCGG TGCTCGCGCC GCACAGCCCG
ATCGAGCAGT ACCGCGACTA CGTGAAGATC CCGCCCGCGT GGCTGGCGGG CGGCAACTGG
CAATTCGTGC TCGGCACCGA CGAAGCGGGC CGCGACATCC TCTCGCGGCT GATGTACGGC
GCGCGGATGT CGTTCTGGAT CGGCTTCGTC TCGGTCGTGC TCGCGCTGAT TCCGGGCGTC
GTGCTCGGGC TCGTCGCCGC GTTCTTCCAG AAATGGGCCG ACACGCCCGT GATGCGCGTG
ATGGACGTGC TGCTCGCGCT GCCGTCGCTG CTGCTCGCCG TCGCGGTCGT CGCGATCATC
GGCCCGGGCC TCACCAACAC GATGTTCGCG ATCGCGATCG TCGCGCTGCC CGCTTACGTG
CGCCTCACGC GCGCGTCGGC GCTCGGCGAG CTGCAGAAGG AGTACGTGAC GGCCTCGCGC
GTCGCGGGCG CGGGCACGCC GCGGCTGATG TTCTCGCAGG TGCTGCCGAA CTGCACGGCG
CCGCTCATCG TGCAGGCGAC GCTCGGCTTC TCGTCGGCGA TCCTCGATGC GGCGGCGCTC
GGCTTTCTCG GCCTCGGCGT GCAGCCGCCG ACGGCCGAGT GGGGCGCGAT GCTCGCGTCC
GCGCGCGACT ACATCGACAA CGCATGGTGG ATCGTCACGA TGCCGGGCCT GTCGATCCTG
ATCTCGGTGC TCGCGATCAA CCTGCTCGGC GACGGGCTGC GCGACGCGCT CGATCCCAAA
CTCAAACGGA TGGCCTGA
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| Protein sequence | MSNMQNAMPS QAAPASGRVL ALREFWANFS RNRGAVGAGI VVLALVAVAL LAPVLAPHSP
IEQYRDYVKI PPAWLAGGNW QFVLGTDEAG RDILSRLMYG ARMSFWIGFV SVVLALIPGV
VLGLVAAFFQ KWADTPVMRV MDVLLALPSL LLAVAVVAII GPGLTNTMFA IAIVALPAYV
RLTRASALGE LQKEYVTASR VAGAGTPRLM FSQVLPNCTA PLIVQATLGF SSAILDAAAL
GFLGLGVQPP TAEWGAMLAS ARDYIDNAWW IVTMPGLSIL ISVLAINLLG DGLRDALDPK
LKRMA
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