Gene BURPS1710b_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0428 
Symbol 
ID3688934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand- 
Start bp442740 
End bp443393 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content73% 
IMG OID637726884 
ProductLysE type translocator 
Protein accessionYP_331842 
Protein GI76809701 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0377494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGC TGCCGATCCT GCTGCAAATC GCCGCCGTCT ACCTCGTCGC GCTCGTCACG 
CCGGGCCCGA ACATCTTCAT GATCTCGCAG CTGTCGCTGT CGGGCCGTCG CGGCCTCGGC 
GCCGTGTCGG CGCTCGGCGT CGGCACCGCG TCGCTCACGT GGGCGACGCT CGCGATGCTC 
GGCGTCGCGG CCGTGCTGCA TCAGCTCGCC TGGCTGTACG AGGCGATCCG GATCGGCGGC 
GCGGTCTATC TCGCGTATTT CGGCATCAAG CTGCTGCGCG CGAGCGCGCA GCGCGACCCC 
GCGCCGGCGG CCGGCCTCGC GGACGACGCG GGCGCCCTCC CGAGCCCGCC CGCGACGCGC 
GATTACCTGC GCGCGTACCG CACGGGCCTC TTCACGTGCC TGACGAACCC GAAATCGTGC 
GTGTTCTGGA CGAGCGTGTT CGCGGCGATG ATGCCCGCGC ACGTGCCGCT GTGGTTCAGC 
GGCGCGACGC TGCTGACGAT CGGCGCGATG TCGGGCGGCT GGTATTGCGG CGTCGCGTAC 
CTGTTCGCGA ATCCGCGCGC GCAGCGCGGC TACCGGCGCG TGCGGCGCCC GCTCGACGCG 
CTGTGCGGCG CGGCGCTCGT CGGCCTCGGC GCGAAGCTCG CGGCCGACCG GTAA
 
Protein sequence
MNLLPILLQI AAVYLVALVT PGPNIFMISQ LSLSGRRGLG AVSALGVGTA SLTWATLAML 
GVAAVLHQLA WLYEAIRIGG AVYLAYFGIK LLRASAQRDP APAAGLADDA GALPSPPATR 
DYLRAYRTGL FTCLTNPKSC VFWTSVFAAM MPAHVPLWFS GATLLTIGAM SGGWYCGVAY 
LFANPRAQRG YRRVRRPLDA LCGAALVGLG AKLAADR