Gene BURPS1710b_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0424 
Symbol 
ID3689942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp438191 
End bp439594 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content68% 
IMG OID637726880 
Productamino acid permease 
Protein accessionYP_331838 
Protein GI76810685 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00909] amino acid transporter 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.386355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTCT TCCGCAAGAA AAACGTCGAC CGCATGATCG CCGGCGCGCA AGCGGCCGGC 
CTCAAGAAGG CGCTCGGCGC GGTCGACCTC ACCTTTCTCG GCATCGGCGC GATCATCGGC
ACCGGCATCT TCGTGCTGAC CGGCACGGGC GCCGTGCAGG CCGGGCCGGC GCTGATGCTG
TCGTTCGTGA TCGCGGCGAT CGCGTGCGGC CTCGCCGCGC TGTCGTACGC CGAATTCGCG
TCGACGATCC CCGTCGCCGG CTCGATCTAC ACGTATTCGT ACGCGACTCT CGGCGAGCTC
GTCGCATGGA TCATCGGCTG GGACCTGATG CTCGAGTACG GGCTCGCCGC GTCCGCGGTG
TCGGTCGGCT GGTCCGGCTA CCTGCAATCG CTGCTGCAGG GCTTCGGCGT GTCGCTGCCG
ACGGCGCTCA CCGCCGCGCC GGGCGCGCTG CCGGGCGTCG TCACGTATTT CAACCTGCCC
GCGTTCGTCG TGATGCTCGT CATCACGACA CTGCTGTCGA TCGGCATCCG CGAATCGACG
CGCGTGAACA ACATCATGGT GTTCATCAAG GTCGCCGTCG TGCTGCTCGT GATCGCGGTC
GGCGTCTTCC ACGTGACGCC CGCGAACTGG AAGCCGTTCA TGCCGCACGG CTGGAACGGC
GTGTTCGGCG CGGCGGCCGT GATGTTCTTC GCGTTCATCG GCTTCGACGC GGTGTCGTCG
GCCGCCGAGG AGGTGAAGAA CCCGAAGCGC GATCTGCCGG TGGGCATCAT CGCCTCGCTC
GGCGTGTGCG CGTTCCTGTA TGTCGCGGTC GCGGCGATCG CGACGGGCAT CGTGCCGTGG
GCCCAGTACG CGAACGTCTC GCATCCGATC TCGTACGCGC TGCAGGTGGC GGGCGAGAAG
TGGGTGGCGG GCTTCATCGA TCTCGGCGCC GTCATCGGCA TGTTGACCGT GATCCTCGTG
ATGAGCTACG GCCAGACCCG GATCATCTTC GCGATGTCGC GCGACGGCCT GCTGCCCGCC
GCGCTCTCGC GCGTGCACCC GCGCTTCGCG ACGCCGTTCC TGACGACCTG GCTCGTCGGC
CTGTTCTTCG GCCTGATCGC CGCGCTGATT CCGCTGAACG TGCTCGCCGA GCTGATCAAC
ATCGGCACGC TCGCCGCGTT CTCGATGGTG TCGATCGCGG TGCTCGTGCT GCGCCGCACG
CACCCGGATC TGCCGCGCGC GTTCCGCTGC CCGGGCGTGC CGCTCGTGCC GATCCTCGCG
GTGGCCGCGT GCCTGTTCCT GATGCTGAAC CTGCAGCCGG TCACGTGGAT CGCGTTCCTG
ACGTGGCTCG TGATCGGCCT GTTCGTGTAC TTCGCGTACT CGCGCAGCCG CTCGAAGCTC
GCGCACGGCG CGCAGCAGCA CTGA
 
Protein sequence
MSLFRKKNVD RMIAGAQAAG LKKALGAVDL TFLGIGAIIG TGIFVLTGTG AVQAGPALML 
SFVIAAIACG LAALSYAEFA STIPVAGSIY TYSYATLGEL VAWIIGWDLM LEYGLAASAV
SVGWSGYLQS LLQGFGVSLP TALTAAPGAL PGVVTYFNLP AFVVMLVITT LLSIGIREST
RVNNIMVFIK VAVVLLVIAV GVFHVTPANW KPFMPHGWNG VFGAAAVMFF AFIGFDAVSS
AAEEVKNPKR DLPVGIIASL GVCAFLYVAV AAIATGIVPW AQYANVSHPI SYALQVAGEK
WVAGFIDLGA VIGMLTVILV MSYGQTRIIF AMSRDGLLPA ALSRVHPRFA TPFLTTWLVG
LFFGLIAALI PLNVLAELIN IGTLAAFSMV SIAVLVLRRT HPDLPRAFRC PGVPLVPILA
VAACLFLMLN LQPVTWIAFL TWLVIGLFVY FAYSRSRSKL AHGAQQH