Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0424 |
Symbol | |
ID | 3689942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 438191 |
End bp | 439594 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637726880 |
Product | amino acid permease |
Protein accession | YP_331838 |
Protein GI | 76810685 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.386355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTCT TCCGCAAGAA AAACGTCGAC CGCATGATCG CCGGCGCGCA AGCGGCCGGC CTCAAGAAGG CGCTCGGCGC GGTCGACCTC ACCTTTCTCG GCATCGGCGC GATCATCGGC ACCGGCATCT TCGTGCTGAC CGGCACGGGC GCCGTGCAGG CCGGGCCGGC GCTGATGCTG TCGTTCGTGA TCGCGGCGAT CGCGTGCGGC CTCGCCGCGC TGTCGTACGC CGAATTCGCG TCGACGATCC CCGTCGCCGG CTCGATCTAC ACGTATTCGT ACGCGACTCT CGGCGAGCTC GTCGCATGGA TCATCGGCTG GGACCTGATG CTCGAGTACG GGCTCGCCGC GTCCGCGGTG TCGGTCGGCT GGTCCGGCTA CCTGCAATCG CTGCTGCAGG GCTTCGGCGT GTCGCTGCCG ACGGCGCTCA CCGCCGCGCC GGGCGCGCTG CCGGGCGTCG TCACGTATTT CAACCTGCCC GCGTTCGTCG TGATGCTCGT CATCACGACA CTGCTGTCGA TCGGCATCCG CGAATCGACG CGCGTGAACA ACATCATGGT GTTCATCAAG GTCGCCGTCG TGCTGCTCGT GATCGCGGTC GGCGTCTTCC ACGTGACGCC CGCGAACTGG AAGCCGTTCA TGCCGCACGG CTGGAACGGC GTGTTCGGCG CGGCGGCCGT GATGTTCTTC GCGTTCATCG GCTTCGACGC GGTGTCGTCG GCCGCCGAGG AGGTGAAGAA CCCGAAGCGC GATCTGCCGG TGGGCATCAT CGCCTCGCTC GGCGTGTGCG CGTTCCTGTA TGTCGCGGTC GCGGCGATCG CGACGGGCAT CGTGCCGTGG GCCCAGTACG CGAACGTCTC GCATCCGATC TCGTACGCGC TGCAGGTGGC GGGCGAGAAG TGGGTGGCGG GCTTCATCGA TCTCGGCGCC GTCATCGGCA TGTTGACCGT GATCCTCGTG ATGAGCTACG GCCAGACCCG GATCATCTTC GCGATGTCGC GCGACGGCCT GCTGCCCGCC GCGCTCTCGC GCGTGCACCC GCGCTTCGCG ACGCCGTTCC TGACGACCTG GCTCGTCGGC CTGTTCTTCG GCCTGATCGC CGCGCTGATT CCGCTGAACG TGCTCGCCGA GCTGATCAAC ATCGGCACGC TCGCCGCGTT CTCGATGGTG TCGATCGCGG TGCTCGTGCT GCGCCGCACG CACCCGGATC TGCCGCGCGC GTTCCGCTGC CCGGGCGTGC CGCTCGTGCC GATCCTCGCG GTGGCCGCGT GCCTGTTCCT GATGCTGAAC CTGCAGCCGG TCACGTGGAT CGCGTTCCTG ACGTGGCTCG TGATCGGCCT GTTCGTGTAC TTCGCGTACT CGCGCAGCCG CTCGAAGCTC GCGCACGGCG CGCAGCAGCA CTGA
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Protein sequence | MSLFRKKNVD RMIAGAQAAG LKKALGAVDL TFLGIGAIIG TGIFVLTGTG AVQAGPALML SFVIAAIACG LAALSYAEFA STIPVAGSIY TYSYATLGEL VAWIIGWDLM LEYGLAASAV SVGWSGYLQS LLQGFGVSLP TALTAAPGAL PGVVTYFNLP AFVVMLVITT LLSIGIREST RVNNIMVFIK VAVVLLVIAV GVFHVTPANW KPFMPHGWNG VFGAAAVMFF AFIGFDAVSS AAEEVKNPKR DLPVGIIASL GVCAFLYVAV AAIATGIVPW AQYANVSHPI SYALQVAGEK WVAGFIDLGA VIGMLTVILV MSYGQTRIIF AMSRDGLLPA ALSRVHPRFA TPFLTTWLVG LFFGLIAALI PLNVLAELIN IGTLAAFSMV SIAVLVLRRT HPDLPRAFRC PGVPLVPILA VAACLFLMLN LQPVTWIAFL TWLVIGLFVY FAYSRSRSKL AHGAQQH
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