Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0422 |
Symbol | |
ID | 3691630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 436124 |
End bp | 436870 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637726878 |
Product | PepSY-associated TM helix family protein |
Protein accession | YP_331836 |
Protein GI | 76808620 |
COG category | [S] Function unknown |
COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0450107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTGTG CGAATGGAAG CCGAAGCGTG AACGCGCCCG AATCGATCGA AAAACACTCC GGCGTCGTGG TGCCGTATCC GGGCTCGCCG CGAAAGCTCG ACGCCTTCGA GTTGGCCGAA CGCCGCCGCC GCTCGCGGCG CGCGACGTTC ATCAAATGGC TGCGCAAGGT GCACGGCTGG GTTGGCCTCT GGGGCGCGGC GCTCGGCCTG CTGTTCGGCG TGACGGGGGT GTTGCTCAAT CACCGCGCGC CGCCGCTGAA GATCTCGTCC GGCGAGCCGC AGGTGAGCCA GCTTCAGCTC GCGCTGCCGT CGCCCGCGCC CGCGACGCCC CACGCGATGG CCGCGTGGAT CCGGCGCGAG CTCGCGTTCG ACGGCCGGCT CGGCCGCGTC CGCAAGGAGC CCGCGCAGCC CGTGGCGTGG GGCGGGCGGC GCGTCGAGCA GCCCGAGCAC TGGCAGTTCG GCCTGTTCGG CCCGCGCAGC AACGTGCAGG TCGAATACTG GAAGGGCAAC GGCTACGTGT CGGTGAAGCG CACCGACAAC GCGTTCCTCA CGGCGCTCAA CAACCTGCAT CGCGGCGTCG GCATGAACCT GTTCTGGGTG CTGCTGATGG ACACGATCGC CGGATCGATG GTGCTGCTGT CGCTGACGGG CGTGCTGCTC TGGACCGAAC TCAACAAGCG GCGCACGGTG GGCGTCGTGC TCGTCGCGGG TTCGGTGGCC GCGGCGCTCG CGGCCGGGCT GACCTGA
|
Protein sequence | MFCANGSRSV NAPESIEKHS GVVVPYPGSP RKLDAFELAE RRRRSRRATF IKWLRKVHGW VGLWGAALGL LFGVTGVLLN HRAPPLKISS GEPQVSQLQL ALPSPAPATP HAMAAWIRRE LAFDGRLGRV RKEPAQPVAW GGRRVEQPEH WQFGLFGPRS NVQVEYWKGN GYVSVKRTDN AFLTALNNLH RGVGMNLFWV LLMDTIAGSM VLLSLTGVLL WTELNKRRTV GVVLVAGSVA AALAAGLT
|
| |