Gene BURPS1710b_0418 details

Gene Information

• Locus tag: BURPS1710b_0418
• Symbol: fliE
• ID: 3689280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 432588
• End bp: 433115
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637726874
• Product: flagellar hook-basal body complex protein
• Protein accession: YP_331832
• Protein GI: 76809519
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1677] Flagellar hook-basal body protein
• TIGRFAM ID: [TIGR00205] flagellar hook-basal body complex protein FliE

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0984144
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGATTAT CCGCAGCGCG GTCAAGCCCG ATCGGGCGAA TAGAGCGGGG TTTCGGCCGT 
ACTTCCGCGG CTGCCGCCGC GGCGCGGCTG CTATGCTTTT TCGCAATCCG GCTTCTGCAA 
CGCTCGCGGG ACGCCGGGGT TCCCCCCGCC GGGCCCGCGC GGCCCGGCTT CTTTTGCGGA 
GATCACATGG TTGCCCCCGT CAACGGCATC GCTTCGGCGC TGCAACAGAT GCAGGCGATG 
GCCGCGCAGG CCGCGGGCGG CGCGAGCCCC GCGACGTCGC TCGCCGGCTC CGGCGCGGCG 
AGCGCCGGTT CGTTCGCGAG CGCGATGAAG GCATCGCTCG ACAAGATCAG CGGCGATCAG 
CAAAAGGCGC TCGGCGAGGC GCATGCGTTC GAGATCGGCG CGCAGAACGT GTCGCTCAAC 
GACGTGATGG TCGACATGCA GAAAGCCAAC ATCGGCTTCC AGTTCGGGCT CCAGGTGCGC 
AACAAGTTAG TGAGCGCCTA CAACGAGATC ATGCAGATGT CCGTCTGA 

 

Protein sequence

MRLSAARSSP IGRIERGFGR TSAAAAAARL LCFFAIRLLQ RSRDAGVPPA GPARPGFFCG 
DHMVAPVNGI ASALQQMQAM AAQAAGGASP ATSLAGSGAA SAGSFASAMK ASLDKISGDQ 
QKALGEAHAF EIGAQNVSLN DVMVDMQKAN IGFQFGLQVR NKLVSAYNEI MQMSV