| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0332 |
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| Symbol | hdah1 |
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| ID | 3690059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 345424 |
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| End bp | 346476 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637726788 |
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| Product | histone deacetylase family protein |
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| Protein accession | YP_331748 |
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| Protein GI | 76810001 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.195031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATGTCG TGCCGCACGG CACGCTGAAC CTCGGCGAGC ATTTCGACAG CCCGCTGAGG
CTCGCGTATA CGAAGCAGTT GCTCGACGCG GTCGGCATGA CCGAGCGCCT GACGCGCGTC
GCTTTCGCGC GTGCGACCGA TGAGCAATTG CTGCGCGTGC ATCGGCCCGA ATATCTGCGG
CAGCTCGCCG AGGCTTGCGC GGTGGCGGGC GAGCAGGTGG TGCGGCTCGG CGACGACGCG
GCGGGCAGCG CGTCGACCGA AGACGTCGCG CGGCTCGCGG CGGGCGCCGC GTGCGCGGCT
GTCGATGCGG TGATGACGGG GCCGCTTCGG CAGGCGTATG CGCTGATCCG GCCGTCTGGC
CACCATGCGG GCGCCGATTT CGCGATGGGC TACTGCTACT ACAACAACGT CGCGATCGCG
GCGCGCCATG CGCAGGCCGC GCACGGCGTC GAGCGGGTGG CGATCGTCGA CTGGGACGTG
CATCACGGCA ACGGCACGCA GCAGGCGTTC TACGACGATC CTTCGGTATT GTTCGTGTCG
CTGCACGAGG CGGCGAATTT CCCGGTCGAC GGCGGCGAGG CGCGTGAGAC GGGCGGCGGC
GCGGGCGCGG GCTACAACGC GAACGTGCCG TTGCCGTCCG GCACGGGCGA CGCCGGCTAT
CGGCACGCGT TCGACGAGCT GGTGCTGCCG CTCGTCGAGG CGTTCGCGCC GCAGCTCATT
CTCGTGTCGG CGGGGCAGGA TGCGAACGCG TTCGATCCGC TCGGCCGCAT GCGCGTGCAG
CGCGACGGGT TCCGGCACAT GGCGCGCGCA TTGCGGCAAG CGGCGGGCGG CGCATGCGGG
GGGCGCATCG TGATGCTGCA GGAGGGCGGC TACAGCCTGC CGTATCTGCC GATCGCGACG
CTCGGCGTGC TCGAGGGGCT CGTCGGCTGG AACGCGCCGT TCGACGATCC GCACCAGTTC
GTCCAGTATC CGCTCGGCGA AGGCGAGCGC GCCGCGGTGA AGGCCGCCCG CGCCGCGCTG
GCGCCGTATT GGCCCACGCT GCATCGATCC TGA
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| Protein sequence | MYVVPHGTLN LGEHFDSPLR LAYTKQLLDA VGMTERLTRV AFARATDEQL LRVHRPEYLR
QLAEACAVAG EQVVRLGDDA AGSASTEDVA RLAAGAACAA VDAVMTGPLR QAYALIRPSG
HHAGADFAMG YCYYNNVAIA ARHAQAAHGV ERVAIVDWDV HHGNGTQQAF YDDPSVLFVS
LHEAANFPVD GGEARETGGG AGAGYNANVP LPSGTGDAGY RHAFDELVLP LVEAFAPQLI
LVSAGQDANA FDPLGRMRVQ RDGFRHMARA LRQAAGGACG GRIVMLQEGG YSLPYLPIAT
LGVLEGLVGW NAPFDDPHQF VQYPLGEGER AAVKAARAAL APYWPTLHRS
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