| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0261 |
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| Symbol | omp38 |
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| ID | 3690757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 270477 |
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| End bp | 271577 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637726718 |
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| Product | outer membrane porin precursor |
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| Protein accession | YP_331678 |
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| Protein GI | 76809920 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGT TTGCGGTAGC GGCGGCGGGC CTTGCCGTCG CGACGGGCGC GCACGCGTCC
GACGGCAGCG TCACGCTGTT CGGCCTGATC GATGCCGGCG TGTCGTACGT GTCGAACGAA
GGCGGCAAGC GCAACGTGTA TTTCGACGAC GGCATCGCGG TGCCGAATCT ATGGGGGCTT
CGGGGCACCG AGGATCTCGG CGGCGGCGCG AAGGCGATCT TCGAGCTGAC GTCGCAATAC
GCGCTCGGCA ACGGCGCCGC GCTGCCGACG CCGGGCTCGA TGTTCTCGCG CACCGCGCTC
GTCGGCCTCT GGAGCGAGCG GCTCGGCAGC GTGACGCTCG GCCAGCAATA CGACTTCATG
ACCGATTCGC TGACGTTCGG CTCGTTCGAC GGTGCGTTCC GCTACGGCGG TCTGTACAAC
TTCCGCCAGG GGCCGTTCTC GAAGCTCGGG ATTCCCGACA ATCCCACCGG CTCGTTCGAC
TTCGACCGGT TGGCGGGTTC GAGCCGCGTG CCGAACTCGG TCAAGTACAC GAGCGCGAAC
CTGAACGGGC TCGTGTTCGG CCTGATGTAC GGTTTCGGCA ATCAGGCGGG CGGCGGGCTC
GCGGCGAACA GCACCGTCAG CGCCGGCCTC AAGTACGAGA CGGGCAGTTT CGCGCTCGGC
GCCGCCTACG TCGAAGTCAA GTATCCGCAG ATGAACAACG GGCACGACGG GCTGCGCAAC
TGGGGGCTCG GCGCGCGTTA TGCACTGTCC GCGTTCGATC TGAACCTGCT GTACACGAAC
ACGCGCAACA CGCTGACGGG CGCGGCGATC GACGTGATCC AGGCCGGCGT GCGCTACGTC
GGCGCGCCGT GGACGATCGG CGCGAACTAC GAGTACATGA AGGGCAACGC GCAGCTCGAT
CGCAACTACG CGCATCAAGT CACGGCGGCC GCGCAGTATG CGCTGTCCAA GCGCACGTCC
GCGTACGTCG AGACCGTGTA CCAGTACGCG GGCGGCAGCG CGGGCGCGCA TGCGTGGATC
AACGGCGTGA TGGGGCCCGA TGCGCAGTCG AGCTCGCGTT CGCAGTTTCT CGCGCGAATC
GGCATGCTTA CCCGTTTCTG A
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| Protein sequence | MKKFAVAAAG LAVATGAHAS DGSVTLFGLI DAGVSYVSNE GGKRNVYFDD GIAVPNLWGL
RGTEDLGGGA KAIFELTSQY ALGNGAALPT PGSMFSRTAL VGLWSERLGS VTLGQQYDFM
TDSLTFGSFD GAFRYGGLYN FRQGPFSKLG IPDNPTGSFD FDRLAGSSRV PNSVKYTSAN
LNGLVFGLMY GFGNQAGGGL AANSTVSAGL KYETGSFALG AAYVEVKYPQ MNNGHDGLRN
WGLGARYALS AFDLNLLYTN TRNTLTGAAI DVIQAGVRYV GAPWTIGANY EYMKGNAQLD
RNYAHQVTAA AQYALSKRTS AYVETVYQYA GGSAGAHAWI NGVMGPDAQS SSRSQFLARI
GMLTRF
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