Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0228 |
Symbol | gspK |
ID | 3689925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 238991 |
End bp | 240241 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637726684 |
Product | general secretion pathway protein K |
Protein accession | YP_331644 |
Protein GI | 76810668 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.407929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCCT TCGCCCTCCT CGCTCGCTTC GCCTCGCCCG GCCGCCCGCG CGCGGCGCTC GGTCCGCATG CGCCGGACGC CGTGCAGCCG GCGCCGGCGC GTTCGCCGCG CGCGCCTCAC GGCGGCAGCG CCGTGGCCGA TGTCCGCGTT TGCCCGCCCG CGCGGCGCCC GGGAGCGCCC GTGCACCGCG AGCGCGGCGT CGCGATCATC AACGCGCTGC TCGTCGTCGC GCTGTCGGCG ATCCTCGTCT CCGGGATGCT GTGGCGCCAG CAGGTGCAGG TGCGCCGGAT CGAGAACCAG CGCCTGCTCG CGCAGGCGCA GTGGGTCGCG CGCGGCGCGC TCGACTGGAC GCGGATGGTG CTGCGCTCCG AGGGCGACAC GGCGCCCGGC ATCACCTATC TCGGCGGGAT CTGGGCGGTG CCGATCGCGA AGACGAAGCT GTCGGATTTT CTCGGCCGCA TCGGTGTGAC CGATTCGGCC GAAGGCTCGG ACACCTATCT GTCCGGCTCG ATCGAGGATG CACAGGCGAA GTTCAATCTG CGCAACCTCG TGTCGTCGCC CGCGCCGGGC GCGCTGCAAC TGAACGCCGC GCAGGTGCAG ACGTTTCAGC GGCTGCTCGC GACGCTCGGG CTCGACCAGC AGCTCGCGAA GATCGTCGCG CGCCGCGTGC GCGCGGGGCT CAAGCAGTCG GCGACGCGCT TCCAGGCGGC CCAGTTGCCG GGCGCCGCGA GCGGCGTGCC CGTTCCGCTG CCGGACGGCG GCACCGAGAG CGGCGGCAAT TTCACCGACG AGCCGGGCAT CGCGGGCGGC GAAGGCCGCG GGCCCGCGCC GCTGATGATG ACGAGCGTCG ATTCGCTGCT CGACGTCGAG GGTTTCACGC CGGAGATGGT CGAGCGGCTG CGCCCGTTCG TCACCGTGCT GCCGACGGTG ACGCCCGTCA ATCTGAACAC CGCGCCCGCC GAGGTGATCG CGGCGCTCGT GCCGGGGATG TCGGTGTCGT CCGCGCAGGC GCTCGTGTCG CGGCGCGAGA CCGTGTTTTT CCGCAACGTC GGCGACGTGC AGCTCGCGCT GCGCGGCTCC GGCGCGCCGA ACGTGAACCT CGATTCGAGT CAGATCGACG TCACGTCCAG CTATTTCATC GTGCATGGCC GAATCGAGCA CGACCGGGCA GTCGTGGATC GCACGTCGCT CGTGTATCGT GATCCGACCA CGCATACGAC GCGCATCGTG CGCATCCGCG ATCAGCTATA A
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Protein sequence | MRAFALLARF ASPGRPRAAL GPHAPDAVQP APARSPRAPH GGSAVADVRV CPPARRPGAP VHRERGVAII NALLVVALSA ILVSGMLWRQ QVQVRRIENQ RLLAQAQWVA RGALDWTRMV LRSEGDTAPG ITYLGGIWAV PIAKTKLSDF LGRIGVTDSA EGSDTYLSGS IEDAQAKFNL RNLVSSPAPG ALQLNAAQVQ TFQRLLATLG LDQQLAKIVA RRVRAGLKQS ATRFQAAQLP GAASGVPVPL PDGGTESGGN FTDEPGIAGG EGRGPAPLMM TSVDSLLDVE GFTPEMVERL RPFVTVLPTV TPVNLNTAPA EVIAALVPGM SVSSAQALVS RRETVFFRNV GDVQLALRGS GAPNVNLDSS QIDVTSSYFI VHGRIEHDRA VVDRTSLVYR DPTTHTTRIV RIRDQL
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