Gene BURPS1710b_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0225 
SymbolgspH 
ID3688985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp237277 
End bp237876 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content73% 
IMG OID637726681 
Productgeneral secretion pathway protein H 
Protein accessionYP_331641 
Protein GI76809460 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCTCGA TGTACGCACG ACCCGGCACG ATTTTCGTTT GCGATACGCG GCGTCACGCG 
GGGGCCGCCC TCGGCGGGGC CGCGAAAGCG CGCGCCGGCG CGTGCGCGGG TGTCTCGTCC
GGGCGCCCGG CGGGCACCGC CTCGGCGCGC CGCGCGCGCG GCTTCACGCT GCTCGAAATG
CTCGTCGTGC TCGTGATCGC GGGCATCCTG GTGTCGGTCG CGTCGCTCAC GCTCAGGCGC
AACCCGCGCA CCGACCTGCG CGAGGAAGCG CAGCGCATCG CGCTGCTGTT CGAGACGGCG
GGCGACGAAG CGCAGGTGCG TGCGCGGCCG ATCGCGTGGC GCGCCACCGA GCATGGTTTC
CGTTTCGACA TCCGCACGGG CGACGGCTGG CGCCCGCTGC GCGACGACGT GCTGCGCGCG
CGCGACTGGG ATGGCGGCGT GACGGGCGCG GCGATCGACT ATCCCGGCTC GGACACGCAC
ACGGACGCGG TCGTATTCGG CACCGAAAGC ATCGACGTGC CGGTGCGCGT CACGCTGTAT
TCGGCGGTCG GCAGCGCGAC GATCGTCGGC ACCGGCAACG GCCGCTACGA GGTGCGGTGA
 
Protein sequence
MFSMYARPGT IFVCDTRRHA GAALGGAAKA RAGACAGVSS GRPAGTASAR RARGFTLLEM 
LVVLVIAGIL VSVASLTLRR NPRTDLREEA QRIALLFETA GDEAQVRARP IAWRATEHGF
RFDIRTGDGW RPLRDDVLRA RDWDGGVTGA AIDYPGSDTH TDAVVFGTES IDVPVRVTLY
SAVGSATIVG TGNGRYEVR