| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0209 |
|---|
| Symbol | tctE |
|---|
| ID | 3691931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 216778 |
|---|
| End bp | 218262 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637726665 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_331625 |
|---|
| Protein GI | 76810939 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTG ATCCGGCTGT GACCAGCCTG CGCCGCACGC TGCTGCGGCG TTTAGCCGCG
CCGCTGTCGA TGCTCGCGCT GATGAGCGGC CTCATTGCCT ACTGGCTTGC GTGGCAATAC
ACGCAGCACG TCGTCGATCG CTCGCTTGCC GATCTCGCCT CGGCGATCTC CAAGCAGATC
CAGATCGCCG GCCCCGACGC GCCGTTCACG GTGCCGCCGC TCGCACAGGC GATGTTCTCC
GATCCGACCG AGCAATTGAT CTACCGGATC AGCGACGGCG AACACGAGCT CGCCGGCGAT
CCGAAGCTGC CGCTGCAAGG CACGAGCGTG CGCCGGATGC ATGTCGCCTA TGTATTCGAG
GCCGAGTACG ACAACCAGGC GGTGCGCGTC GCGCAAGTGC GCGTCGCGCA GACGGAAAGC
GGCAATCCGA TGATCGTCGA GGTCGCGCAG CCGGTGCGCT ATCGTTACCG GATCGCGGCG
GAATTCCTGA TCGCGATCAT GATGCCGCTG CTGCTGCTGC TGCTCGCCGG CTGGGGAATC
GTGTGGCGCG TCGTCAACCA GCAGCTCGGC CCGCTCACGC ATCTCGCCGA TTCGCTGAAC
CGGCAGACGC ACACGTCGCT CGAGCCCGTC GATGAAACCG AGGTGCCGCT CGAGATCCGG
CCGCTCACGA GCGCGATGAA TGCGCTGCTC GGCCGCCTGA AAACCGCACT CGACGCGCAG
CGCAAGTTCA TCGCCGATGC CGCGCATCAG CTGCGCACGC CGCTCACCGC GATCAAGCTG
CACGCGGAGC AGGCGGCCGT TGCGCGCGAT CCGCAACAGG CGCTGACCGC GGTGCGCGAG
CTGCGCTCGG CGGCCGATCG CGCCGTGCGG CTGTCAAATC AGTTGCTGTC GCTCGCGCGC
GCGGAGCCGG GCGAGCAGGC GGCCCGCTTC GTCGATGTCG ATCTGGCCGC CCTCGCATTC
GAAACCGGTG CCGAATGGGT GCCGCGCGCG CTCGCCGCGC ATGTCGACCT CGGCTTCCAA
CGCGGCGACG GCCGCGGCGA CGATGAGCCG CTCCTCGTGC GCGGCAACCC GGTGCTGCTG
CGCGAAGTGA TCGCGAACCT GCTCGACAAC GCGCTGAAAT ACGTGCCGCT CGCGCGGCCG
CAGGGCGCGC GGATCACGAT GGACGTGTCG CGGATCGCGC TCGACGAAGG CCACGCGGCG
GCCGAGATCG TCGTCGAGGA CAACGGCTCG GGCGTGCCCG CCGCGCAGCA GGCGGACCTG
TTCAAGCGCT TCTTCCGCGG CGACGCGCAA AGCGGCAACG GCGTCGAGAC GGGCGCGGGC
CTCGGCCTCG CGATCGTCCA CGACATCATC GCGATGCACG GCGGAACCGT ATCGTACGCG
GATGCGCCGG AAGGCGGCTC GTGCTTCATC GTACGCGTGC CGCTCGCGGA CACGCCGTCC
ACGCCCGCGC CGCCCCCCTG TGAATCGCCG GCCGCTTCGG CCTGA
|
|---|
| Protein sequence | MSPDPAVTSL RRTLLRRLAA PLSMLALMSG LIAYWLAWQY TQHVVDRSLA DLASAISKQI
QIAGPDAPFT VPPLAQAMFS DPTEQLIYRI SDGEHELAGD PKLPLQGTSV RRMHVAYVFE
AEYDNQAVRV AQVRVAQTES GNPMIVEVAQ PVRYRYRIAA EFLIAIMMPL LLLLLAGWGI
VWRVVNQQLG PLTHLADSLN RQTHTSLEPV DETEVPLEIR PLTSAMNALL GRLKTALDAQ
RKFIADAAHQ LRTPLTAIKL HAEQAAVARD PQQALTAVRE LRSAADRAVR LSNQLLSLAR
AEPGEQAARF VDVDLAALAF ETGAEWVPRA LAAHVDLGFQ RGDGRGDDEP LLVRGNPVLL
REVIANLLDN ALKYVPLARP QGARITMDVS RIALDEGHAA AEIVVEDNGS GVPAAQQADL
FKRFFRGDAQ SGNGVETGAG LGLAIVHDII AMHGGTVSYA DAPEGGSCFI VRVPLADTPS
TPAPPPCESP AASA
|
|---|
| |