Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0194 |
Symbol | livK |
ID | 3688830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 199763 |
End bp | 201184 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637726650 |
Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | YP_331610 |
Protein GI | 76810036 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.63329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACGG CGGCGGCGAG ACGGGCGGCC GGCCGCGTTT TTTGTAACCG CGGCGCGGGC GGCATCGGTC GGAAGATCGC GGTAGAGGCA GCAGAAGGGC GCGTGCGATG CGCACGCGCG AGGGGAGCGC AACAGCAAGA AGAACGCGCC CCGCGCCGGT TTCACGTCGA ACGTGAAACC GGCGCGGCGG CGTGCAGGTT CGATCGGTGC GCCATGTCGC CATGTCCGCT CGATCGCGTT TCGCGCAGCG TTTGGAGACA CACAATGAAA ATGAATCGAT GGATCGAGGT CGCGTTCGCG GCCGGCTGCC TATGTACTGC CGGGCTTGCG TCGGCGCAGG TGAAGATCGG CGTCACGGTT TCGGCAACGG GGGCCGCCGC GTCGCTCGGC ATTCCCGAGA AGAATACGGT TGCGTTGCTG CCGAAGGAGA TCGGCGGCAA GCGCGTCGAG TACATCGTGC TCGACGATGC GTCGGACACG AGCCGCGCAG TGCAGAACAC GCGCAAGCTG ATCGACGAGG ATCATGTCGA CGCGATCGTC GGCTCGTCGA TCACGCCGAA TGCGCTCGCG ATGATCGACG TCGTCGCGCA GGGCAAGACG CCGGCGATCT CGCTTGCCGC AAGCGCGCAC ATCATTGCGC CGATGGATGC GAAGCGCGCA TGGGTGTTCA AGACGCCGCA AAACGATCGC CTGATGGCTG ACGCGCTCGC CGGCTACATG GCGAAGCACG GCGTGAAGAC GGTCGGCTTC ATCGGCTTCG CGGATGCGTA TGGCGACGGC TGGTATGGCG TGTTCAGCGC GGCCGCCGCT GCGAACGGGC TCAGGATTGT CGCGAACGAG CGCTACAACC GCACCGATGC ATCGGTGACG GGGCAAGTGC TGAAGACGTT GGGCGCGCGC CCCGACGCGG TGCTGATCGC CGGCGCGGGC ACGCCCGCCG CGCTGCCCGC GAAGACGCTG AAGGCGCGCG GTTACACGGG CAAGGTCTAT CAAACGCACG GCGTCGCGAA CAACGATTTC CTGCGCGTCT GCGGCAAGGA TTGCGACGGC GAATTGCTGC CGGCGGGGCC GGTGCTCGTT GCCGATCAAC TGCCCGATTC GAATCCGGCC AAGCAGCCGG CGCTCGCGTA CAAGGCCGCG TATGAGAAGG CGTACGGCGC GGCAGCGGTG TCGACGTTCG GCGGCCATGT GTGGGACGCG GGGCTGATGC TTCAGCGCGC GATTCCGGAC GCGCTGAAGA AGGCGCAGCC CGGCACGCCG GCGTTCCGCG AGGCGCTGCG CGGTGCGCTC GAGAACGTGA AGGACTTGCC GGTGTCGCAC GGCGTGATCA ACACGACGCC CGCCGACCAC AACGGCTTCG ATACGCGCGC GCGCGTGATC GTGCAGATCG TCGGCGACAA GTGGAAACTG CAGGCTGATT GA
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Protein sequence | MATAAARRAA GRVFCNRGAG GIGRKIAVEA AEGRVRCARA RGAQQQEERA PRRFHVERET GAAACRFDRC AMSPCPLDRV SRSVWRHTMK MNRWIEVAFA AGCLCTAGLA SAQVKIGVTV SATGAAASLG IPEKNTVALL PKEIGGKRVE YIVLDDASDT SRAVQNTRKL IDEDHVDAIV GSSITPNALA MIDVVAQGKT PAISLAASAH IIAPMDAKRA WVFKTPQNDR LMADALAGYM AKHGVKTVGF IGFADAYGDG WYGVFSAAAA ANGLRIVANE RYNRTDASVT GQVLKTLGAR PDAVLIAGAG TPAALPAKTL KARGYTGKVY QTHGVANNDF LRVCGKDCDG ELLPAGPVLV ADQLPDSNPA KQPALAYKAA YEKAYGAAAV STFGGHVWDA GLMLQRAIPD ALKKAQPGTP AFREALRGAL ENVKDLPVSH GVINTTPADH NGFDTRARVI VQIVGDKWKL QAD
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