Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0131 |
Symbol | sdaA |
ID | 3691315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 139179 |
End bp | 140567 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637726587 |
Product | L-serine ammonia-lyase |
Protein accession | YP_331547 |
Protein GI | 76812039 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTCA GCGTGTTCGA TCTTTTCAAA ATCGGTATCG GCCCGTCGAG CTCGCATACG GTCGGGCCGA TGCGCGCCGC ACTGATGTTC GCGCAAGGGC TCGAGCGCGA CGCGCTGCTC GCCGCGACCG CGAGCGTGAA GGTCGAGCTG TACGGCTCGC TCGGCGCGAC CGGCAAGGGC CACGGCACCG ATCGCGGCGT GATGCTCGGC CTGATGGGCG ACGCGCCCGA CACCGTCGAT CCGTCGACGA TCGCCGCGCG GCTCGACGCG GTGCGCACCT CGAAAACGCT CGCGCTACTC GGCACGCATC CCGTACCGTT CGTGCCGAAG GAACACATCG CGTTCTACCG GCAGGCGCTG CCCGAGCACC CGAACGCGAT GAAGCTGCGC GCGGCCGACG CGGCGGGCGC GGTGCTGCGC GAGGCGACGT ATCTGTCGGT GGGCGGCGGC TTCGTCGTCA CCTCGGGCGC GCCGAACACG AAAGTGCTCG CCGCCGCCGA ACAGATGCCG CACCCGTTTC GCACGGGCGC CGAGCTGCTC GCGCTCACCG CGTCGACCGG CAAGTCGATC GCGCAGCTGA TGTGGGAGAA CGAGCGCGCG TGGCACACCG AGGAGGAAAC GCGCACGGGC CTGCTGAAGA TCTGGGACGT GATGCAATCG TGCGTCGCGC GCGGCTGCGG AATCGGCAAC CCCGACGCGG ACGGCAACCT GCCCGGGCCG TTCCAGGTCA AGCGCCGCGC GCCGCAGCTC TATCGCACGC TGACGGGCCA TCCGGAACGC GCGCTGCAGG ACCCGCTGTC GATGGTCGAC TGGATCAACC TGTATGCGAT CGCGGTCAAC GAGGAAAACG CGGCGGGCGG GCGCGTCGTC ACCGCGCCGA CCAACGGCGC GGCGGGCATC ATCCCGGCCG TCCTCCATTA CTACACGCGC TTCACGCCGG GCGCGAACGA GCAGGGCGTG ATCGATTTCC TGATGACCGC GGCGGCGATC GGCATCCTCT ACAAGCTCAA CGCATCGATC TCGGGTGCCG AAGTCGGCTG TCAGGGCGAA GTCGGCGTCG CGTGCTCGAT GGCGGCGGGC GCGCTCGCCG CGGTGCTGGG CGGCACGCCG CAGCAGGTCG AGAACGCGGC CGAGATCGGG ATGGAGCATA ACCTCGGCCT CACCTGCGAT CCGGTCGGCG GGATGGTGCA GATTCCGTGC ATCGAGCGCA ACGCGATGGC GTCGGTGAAG GCCGTCAACG CCGCGCGAAT GGCGCTGCGC GGCGACGGCA GCCACTACGT GTCGCTCGAC TCCGTGATCA AGACGATGCG CGAAACCGGC GCGGACATGA AGACGAAGTA CAAGGAGACC TCGCGCGGCG GGCTCGCGGT GAATATCGTC GAGTGCTGA
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Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAALMF AQGLERDALL AATASVKVEL YGSLGATGKG HGTDRGVMLG LMGDAPDTVD PSTIAARLDA VRTSKTLALL GTHPVPFVPK EHIAFYRQAL PEHPNAMKLR AADAAGAVLR EATYLSVGGG FVVTSGAPNT KVLAAAEQMP HPFRTGAELL ALTASTGKSI AQLMWENERA WHTEEETRTG LLKIWDVMQS CVARGCGIGN PDADGNLPGP FQVKRRAPQL YRTLTGHPER ALQDPLSMVD WINLYAIAVN EENAAGGRVV TAPTNGAAGI IPAVLHYYTR FTPGANEQGV IDFLMTAAAI GILYKLNASI SGAEVGCQGE VGVACSMAAG ALAAVLGGTP QQVENAAEIG MEHNLGLTCD PVGGMVQIPC IERNAMASVK AVNAARMALR GDGSHYVSLD SVIKTMRETG ADMKTKYKET SRGGLAVNIV EC
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