Gene BURPS1710b_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0104 
Symbol 
ID3689819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand+ 
Start bp105889 
End bp106512 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID637726560 
ProductLysE family protein 
Protein accessionYP_331521 
Protein GI76810872 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.063661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTCG AAACCTGGCT CGCGTTCGCC GGCGCGAGCA TCGTGCTTCT GATGATTCCC 
GGCCCGACGA TCCTGCTCGT GATCGGCGAT TCGCTCGCGA ACCGCCATCG GTCGTCGTGG 
AGCACCGTCG CGGGCGTCGC GGCGGGCGAC ACCACCGCGA TGACGATCTC GCTCGCCGGC 
GCGGGCGCGC TGCTCGCGAT GTCGGCGGCC GCGTTCACCG CGCTCAAGCT TGTCGGCGGC 
GGCTATCTCG TCTATCTCGG CATCCGTTCG ACTCTGCATG CGCGCCGCAT CGGCGCGATG 
GACGTGCGCA TCGAGCGCCG TTCGGCGAAG CGGCGTTTCC TGTCCGCGTG GGCCGTCACC 
GCGCTCAATC CGAAGAGCAT CGTGTTCTTC GTCGCGTTCG TTCCGCAGTT CATCTCGCCG 
CACGAGACGT TCGCGCGGCA ATGCGCGATC CTGCTGCCGA CCTTCGTGTG CCTCGCGGCG 
ATCAACGCGG CCTGCTATGC GCGCATCGCG CGTTTCGCCG CTGCGCGGCT GACGGGCGCC 
GCCGCGCAGC GGCGCTTCGG GTACGGCGGG GGCGCCGCGC TGATCGGCGC GGGCGCATTG 
ACGCTCGGCA TGTCGCGAAG CTGA
 
Protein sequence
MSVETWLAFA GASIVLLMIP GPTILLVIGD SLANRHRSSW STVAGVAAGD TTAMTISLAG 
AGALLAMSAA AFTALKLVGG GYLVYLGIRS TLHARRIGAM DVRIERRSAK RRFLSAWAVT 
ALNPKSIVFF VAFVPQFISP HETFARQCAI LLPTFVCLAA INAACYARIA RFAAARLTGA 
AAQRRFGYGG GAALIGAGAL TLGMSRS