Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0029 |
Symbol | |
ID | 3691778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 34601 |
End bp | 35269 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637726485 |
Product | amino acid transporter LysE |
Protein accession | YP_331447 |
Protein GI | 76811302 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0393564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTGC ATACGTGGTG GCTGTTCGTC GCGACGGTGT TCGTCGTGTC GGCGATTCCC GGGCCGAACA TGTTGCTCGT GATGACGCAC GGTGCGCGTC ACGGGCTACG GCGTTCGACG GCGACGATGG CGGGCTGCAT GACGGCGCTC GTCGCGATGC TGTCGGTGTC CGCCGCGGGC CTCGGCGTGT TCCTCGAGGC GTGGCCCGCG ATGTTCGATG CGCTGCGTTT CGCGGGCGCC GCGTATCTGA TCTATCTGGG CGTGAAGGCA TGGCGCGCGC GCGTCGACGA GCCGTCCGAT GCGCAATCCA ATGCGCACGC CGAGGCCGCG GCGCCGCGCG CGGGCCGTTC GGGCTCGGCG GGCCAGGGGT TTCGTTGGGC GCTCTTTCGC AACGGCTTTC TCGTCGCGGG CAGCAATCCG AAGGCGATTC TGTTCGCCGC CGCGCTGCTG CCGCAGTTCA TCGACGCTTC CGCGCCGACG CTGCCGCAGT TCGGCATCCT CGTCGCGACG TTCGCGGTGA TCGAGGTGAG CTGGTACATC GTCTACGCGT CGTTCGGCAC GCGGATCGGC GTGACGCTGC GCAGCGCGAA CGTCGCGAAG GCGTTCAATC GGCTGACGGG CGGCCTGTTC GTCGGCTTCG GCGCGATGAT GGCGCTCGTG CGGCACTGA
|
Protein sequence | MNLHTWWLFV ATVFVVSAIP GPNMLLVMTH GARHGLRRST ATMAGCMTAL VAMLSVSAAG LGVFLEAWPA MFDALRFAGA AYLIYLGVKA WRARVDEPSD AQSNAHAEAA APRAGRSGSA GQGFRWALFR NGFLVAGSNP KAILFAAALL PQFIDASAPT LPQFGILVAT FAVIEVSWYI VYASFGTRIG VTLRSANVAK AFNRLTGGLF VGFGAMMALV RH
|
| |