| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5057 |
|---|
| Symbol | |
|---|
| ID | 3683539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 6351998 |
|---|
| End bp | 6353077 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637720418 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_325549 |
|---|
| Protein GI | 75911253 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.312058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATTG CTCAGGTAGC CCCATTATGG GAGAGAGTAC CCCCGCCTGC TTACGGCGGT
ATAGAGTTAG TAGTGGGGTT ATTAACAGAT GAGTTAGTCC GACGTGGACA CGAAGTTACT
CTGTTTGCAT CGGGAGATTC TATCAGTTTA GCAAACCTAG TATCAGTTCA TCCCCGTGCG
CTAAGGCTTG ATTCCAGTGT TAAGGAATAC GGCATTTATG AAATGCTCCA ACTAAGCACA
GTCTATGAGC GTGCAGATGA GTTTGATATC ATTCATTCAC ACATGGGTTG TGCATCATTA
CCTTACACAA AGTTAGTCAA AACACCCACT GTTCACACTC TACACGGCAT TTTTACCCCT
GACAACGAAA AAATGTTTAG GTATGCCAAA ACAGAGCCTT TTGTGAGTAT TTCGGATGCA
CAACGGGATC TGAGATTAGG ACTTAATTAT GTGGGAACAG TCTACAACGG CATTGATGTT
AATAGTTATA AATTTTATCC CCAACCGGAT GAACCACCAT ATTTAGCGTT TTTAGGTCGA
ATATCTCCAG AAAAAGGTAC ACATCTAGCA ATAGAAATTG CCAAAAAATC TGGCTGGCAT
TTAAAAATTG CAGGTAAAGT AGATGTCGTT GATGTGGAAT ATTTTGAAAA GGAAATTAAA
CCATTAATTG ATGGTAAGCA AATTGAATAT TTAGGTGAAG CAGACCACAC ACAAAAAAAT
GTATTGATGG GAGGTGCAGT CGCCACCCTA TTCCCTATTA CGTGGAGAGA ACCATTCGGA
TTAGTAATGG TTGAGTCAAT GGCATCAGGT ACGCCTGTGA TTGCGATGAA TCTTGGCTCT
ACAACAGAGG TAATTGCCCA CGGTAAAACA GGCTTCCTAT GCAGTAATGT AGAAGAATGC
GTTAGTGCGA TCGCCAAAGT TGCAGATTTA GACCGTTATA CTTGTCGGGA GTATGTGCAG
AACCGTTTTA GCCTGCAAGC CATGACCGAA GGCTATGAAG AAGTTTATCG ACAAATTTTG
CAACAGCGCT TTGCTAATAA TGGGCATCAC CGGAGTACAG TTGCTTTGAG TAAAGTATAG
|
|---|
| Protein sequence | MRIAQVAPLW ERVPPPAYGG IELVVGLLTD ELVRRGHEVT LFASGDSISL ANLVSVHPRA
LRLDSSVKEY GIYEMLQLST VYERADEFDI IHSHMGCASL PYTKLVKTPT VHTLHGIFTP
DNEKMFRYAK TEPFVSISDA QRDLRLGLNY VGTVYNGIDV NSYKFYPQPD EPPYLAFLGR
ISPEKGTHLA IEIAKKSGWH LKIAGKVDVV DVEYFEKEIK PLIDGKQIEY LGEADHTQKN
VLMGGAVATL FPITWREPFG LVMVESMASG TPVIAMNLGS TTEVIAHGKT GFLCSNVEEC
VSAIAKVADL DRYTCREYVQ NRFSLQAMTE GYEEVYRQIL QQRFANNGHH RSTVALSKV
|
|---|
| |