| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5047 |
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| Symbol | |
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| ID | 3683528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6337386 |
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| End bp | 6338525 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637720407 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_325539 |
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| Protein GI | 75911243 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.554063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.412974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCC TTGATGCGAG AAACATTGCA AATATGAAAG AGGCTGGCTA TTACGATGAA
AGCATCACTA ATGGGGTAGT TGTAATGGTA GAACCATACA GCCAACAAAA GCAAATCCAG
CAGGTTGTTT ACCGTATATT AGATGCTAAT TTAGACCGCG CTCGTGAAGG GTTGCGAATT
ATTGAAGAAT GGTGTCGCTT TGGGTTGAAT AGCGGCCAGT TGGCAGGGGA ATGTAAGTAC
TTGCGCCAAG AGGTGGCTGT TTGGCACACA GAAGAATTGC GAGCAGCAAG AGATACAGCA
GGTGATCCCG GCACTGATTT GAGCCATCCA CATGAGGAAC AACGCTCTAG TATTAAGGCG
TTGTTACAAG CTAACTTTTG TCGTGTGGAA GAAGCTTTGC GGGTGTTGGA GGAATACGGT
AAGCTTTATC ACCCGAAAAT GGGACAGGCT TGTAAGCAGA TGCGATATCG AGTTTACAGC
CTGGAAACTA ATTTGATGGG TCATCAGCGC CATCAACTGC TGCGGCGATC GCGTTTATAT
CTTGTCACTT CCCCATCGGA AAGTTTATTA CCGACGGTGG AAGCTGCTCT CAAGGGCGGC
TTGACATTGT TACAATATCG TGACAAGGAC GCTGATGATT CTGTCCGTTT GGAACTGGCG
ACGAAACTCC GCCAACTCTG TCACAGCTAC GGCGCTTTAT TTATTATCAA TGACAGGGTG
GATTTGGCTC TGGCTGTGGA TGCTGATGGT GTGCATCTAG GTCAGCAAGA TATGCCCATC
GCTACTGCTA GGCAATTACT AGGCCCCCAA CGTCTTATCG GTCGTTCTAC TACCAATGCT
GATGAAATGC AAAGGGCGAT CGCTGAAGGT GCAGACTATA TAGGTGTAGG GCCCGTATAC
GAAACTCCCA CCAAAGTAGG TAAGGCGGCG GCTGGTTTAG GATATGTGAG TTATGCGGCT
CAACATAGTT CAGTTCCCTG GTTTGCTATT GGGGGCATTG ATGCCAATAA TATCAATGAT
GTGATTGATG CAGGAGCTGA AAGAGTGGCG GTAGTGCGAT CGCTCATGCA GGCGGAACAA
CCTACCCTAG TCACACAATA TTTGATTTCT CAACTCCATC GCATTCAGCC AGAAAGTTAA
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| Protein sequence | MQILDARNIA NMKEAGYYDE SITNGVVVMV EPYSQQKQIQ QVVYRILDAN LDRAREGLRI
IEEWCRFGLN SGQLAGECKY LRQEVAVWHT EELRAARDTA GDPGTDLSHP HEEQRSSIKA
LLQANFCRVE EALRVLEEYG KLYHPKMGQA CKQMRYRVYS LETNLMGHQR HQLLRRSRLY
LVTSPSESLL PTVEAALKGG LTLLQYRDKD ADDSVRLELA TKLRQLCHSY GALFIINDRV
DLALAVDADG VHLGQQDMPI ATARQLLGPQ RLIGRSTTNA DEMQRAIAEG ADYIGVGPVY
ETPTKVGKAA AGLGYVSYAA QHSSVPWFAI GGIDANNIND VIDAGAERVA VVRSLMQAEQ
PTLVTQYLIS QLHRIQPES
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