Gene Ava_5046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5046 
Symbol 
ID3683527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6337075 
End bp6337287 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content44% 
IMG OID637720406 
Producthypothetical protein 
Protein accessionYP_325538 
Protein GI75911242 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.461936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.383391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATC CAATTACCTT ACAAGTAAAT GGGGAAACCC ATAATTGCTC ATCTCAAACT 
CCCTTACCCG ATTTACTCCA ACAATTGGGG TTCAATCCCC GATTAGTGGC GGTTGAGTAT
AATGGGGAAA TTTTACATCG CCAGTTCTGG GAACAGACTC AAGTACAATC AGGCGATCGC
TTAGAGGTAG TGACAATTGT CGGTGGTGGT TAG
 
Protein sequence
MSNPITLQVN GETHNCSSQT PLPDLLQQLG FNPRLVAVEY NGEILHRQFW EQTQVQSGDR 
LEVVTIVGGG