Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_5045 |
Symbol | |
ID | 3678901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 6335812 |
End bp | 6337059 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637720405 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_325537 |
Protein GI | 75911241 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.462239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATA TCTCGCAACT GGCTACAAAA ATCAGAGACA CGACTGCATC CCCAAATATC TTAGTAATAT CGCGTTTTTT CTTGCCTAAA GAAGCTGTAA TTGGGGAATA TCTCTACAAT CGCTGTCTTC AAGATCCAGA ACAAGTAATA GTTCTGGCAG CTAGTTGTAG AGGTGATAAA GTGTTTGACC AAGCACAAAA ATTTCCTGTA TATCGCTGGC CTAACCCTAA ATACTGGCTT GGTGGTTTTT TAGGAAGTTG TCTACAACCT TTGTTTAATT TGGTTGCACC ATTTGTTCTG GCGCTCAAAC TTTATTTTCG TTATCACTAC CGCTATATTG AATGGGGACA TGGCTATAAC TTCCCATCAC TCCTATTATT AAGCTATATC TTACCCATAC GCTTCTTTAT TTACTTACAC GGTAATGACC TTGGTAGCGT TGTAGACAAT CCTGTATGGC GATCGCTCTT TAAGTTAACA CTGTCACGAG CTGAAGGCAT TGTGTGTAAC AATTCCTTAA CCCAAGATTA TCTGAGAAAT ACCTTCCGGT TACAAACCCC TACCCACGTT ATCCATCCAG TAGTTAGACC AGAAAAATTT GGACTGGGAA GCAATAGCCA GAGTCTAGAT GAATTAGGTG ATGGCATTCT ACCCACTTTA GGCGATCGCC TGCGTCAAGC TTATAATATC CCCCAAAGTG CCATAGTCAT TCTTTCCGTA GGGCGCTTAG TCAAACAAAA AGGCTTTGAC CGTGTTATTG AAAACCTACC ACTACTTTTA ACAATTGGTG TAGATGTTCA TTACATCATT TGTGGTCAAG GTCCTTGTGA GTCTGAACTA AAAGCCTTAG CAGAGAGGTT GCGTGTAGAT AAGCGGGTAC ACTTTGCCGG GTATGTGAAC AATCGAGAAT TAGCAGGTTA TTACGCAGCT TGCGATATAT TTGCCATGCT CGCTTTGTCA AATACTCCAG CTAGCCGATT AGAAGGATGT GGTAGTGTCT ACTTAGAAGC TAGCTATTTT GGTAAACCTG TAATTGCTTC TCGTCACCCG TCCTTAATTG ATACGGTACG CCATGAAGAA AATGGCTTGC TGGTAAATCC CAAGTCTGGT TACGAAGTTT TTCAAGTATT CAAACAATTG TGCCAAAATC AGCAATTGCG TGAACAACTT GGTCGTCAGG GAAAAGAATT AGCCAAGCGC AAAACCTTAC ACCGTTCTTT ATACCTTGGG CAAGGGGTTA GAAGCTAG
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Protein sequence | MEHISQLATK IRDTTASPNI LVISRFFLPK EAVIGEYLYN RCLQDPEQVI VLAASCRGDK VFDQAQKFPV YRWPNPKYWL GGFLGSCLQP LFNLVAPFVL ALKLYFRYHY RYIEWGHGYN FPSLLLLSYI LPIRFFIYLH GNDLGSVVDN PVWRSLFKLT LSRAEGIVCN NSLTQDYLRN TFRLQTPTHV IHPVVRPEKF GLGSNSQSLD ELGDGILPTL GDRLRQAYNI PQSAIVILSV GRLVKQKGFD RVIENLPLLL TIGVDVHYII CGQGPCESEL KALAERLRVD KRVHFAGYVN NRELAGYYAA CDIFAMLALS NTPASRLEGC GSVYLEASYF GKPVIASRHP SLIDTVRHEE NGLLVNPKSG YEVFQVFKQL CQNQQLREQL GRQGKELAKR KTLHRSLYLG QGVRS
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