| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5042 |
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| Symbol | |
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| ID | 3678898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6330549 |
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| End bp | 6331256 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637720402 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_325534 |
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| Protein GI | 75911238 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.319742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.272315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAAT TACAGCGAAT TACGATCGCA CCCTCTCAAC TCCAACAAGA ACAAGTTTTA
CTGACAACCC AACAAAAACA TTACTTAAAA CGGGTGTTAC GATTGCGTGA GGGCGATCGC
TTTATTGTTA TGGATGGACT GGGTAAGTGG TGGTTGGCTA GACTCACGGA AGAACAAGCC
CAGGTATTAG AAGAATTAGC CGTAAAAACA GAATTACCTG TAGCAATTAC GTTGATGATT
GCTTTACCTA AAGGTAGTGG ATTTGATGAA GTTGTGCGGA GTTGTACGGA GTTGGGAGTA
GCTTGTATTG CTCCAGTGTT GAGCGATCGC ACTTTACTAA ATCCCAGTCC CCAAAAGCTA
GAACGTTGGC GACGTATAGC CGCCGAAGCT GCTGAACAAT CAGAACGGGC TTTTGTGCCA
ACGATTTTAG AGCCTGTGGC TTTTAGTGAT GCTGTTAATA ATGTTACAGC CTTTCATCGA
TACATCTGTG AAGCCCGTGG CGAATATGTG CATTTGCAAA ACCTTCTCAC AGACATATCT
GGGGAAATTG TGATAGCGAT CGGCCCAGAG GGTGGATGGA CAGATAAAGA ATTAGAGGAA
GCTGTCACCT TTGGCTTTCA ACCAGTATCC TTAGGGGGAC GAATCCTACG TGCAGTTACA
GCCCCATTAG TAGCATTATC CTTAATTAGC GCAGCTTGTG AAGGATAA
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| Protein sequence | MSQLQRITIA PSQLQQEQVL LTTQQKHYLK RVLRLREGDR FIVMDGLGKW WLARLTEEQA
QVLEELAVKT ELPVAITLMI ALPKGSGFDE VVRSCTELGV ACIAPVLSDR TLLNPSPQKL
ERWRRIAAEA AEQSERAFVP TILEPVAFSD AVNNVTAFHR YICEARGEYV HLQNLLTDIS
GEIVIAIGPE GGWTDKELEE AVTFGFQPVS LGGRILRAVT APLVALSLIS AACEG
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