Gene Ava_5039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5039 
Symbol 
ID3678895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6327808 
End bp6328458 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content42% 
IMG OID637720399 
Productlipase, class 2 
Protein accessionYP_325531 
Protein GI75911235 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.420065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTC GAAATCTGCA ACGCAACCCC ATATTGCTAG TGCATGGCAT TACCGATACA 
GAAGCTGTAT TTGATCAAAT GGCAGCTTAT TTAAGACAAA TGGGTTGGAC TGTATACACA
CTGAATTTAG TACCTAACAA CGGCGAAGCC CCGCTTAATG TATTAGCACA GCAGGTAGCT
GATTATGTTG CTGCAAACAT TACTCCCGAA CAACCATTCG ATTTAGTTGG CTTTAGTATG
GGGGGAATTG TCAGCCGTTA TTATGTGCAG AGATTGGGGG GTATTAGTCA TGTGCAACGC
TTTGTGACGA TTTCTTCTCC TCATTATGGT ACTGTGATTG CCTATGCTTC TCAGCGTCCT
GGCTGTGTGC AGATGCGTCC TAATAGCCTT TTCCTTCAAG ATTTGAATCA TGATGTCCAA
ATGTTAGAGG AGTTAAATTT CACTTCTATT TGGACACCTT ATGATTTGAT GATTGTACCT
ACCCACAGTT CAAAAATGCC AGTTGGTAAA GAACTGAGTA TTCCCGTAGC ATTGCATTCA
TGGATGCTGA GAGATGTGAG GAGTATAGAG GCCGTAGCCG CAGCTTTAGC AGAACCGATT
AATTGCGATC GCCGATTTGA ATATATTCCT AACTCATCAA TTCACAATTG A
 
Protein sequence
METRNLQRNP ILLVHGITDT EAVFDQMAAY LRQMGWTVYT LNLVPNNGEA PLNVLAQQVA 
DYVAANITPE QPFDLVGFSM GGIVSRYYVQ RLGGISHVQR FVTISSPHYG TVIAYASQRP
GCVQMRPNSL FLQDLNHDVQ MLEELNFTSI WTPYDLMIVP THSSKMPVGK ELSIPVALHS
WMLRDVRSIE AVAAALAEPI NCDRRFEYIP NSSIHN