Gene Ava_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5038 
Symbol 
ID3678894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6326955 
End bp6327803 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content42% 
IMG OID637720398 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_325530 
Protein GI75911234 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.434824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAATAA CAGAACATAA AATAACAGTA AATACTTTAG AGTGGTTTTA TCGGGAATCT 
GAACCAGTTG GTAGAAGTGA CTTATTACCC GTGTTGTTAC TGCATGGCAT ACCATCACAA
AGTTACAGTT GGCGTAATAT TATACCAGCT TTAGCAGCTC AAGGAACGCG AGCGATCGCC
CCAGATTGGA TTGGTTCTGG CTTTTCTGCC AAGCCGGAGA AACACGAATT TGCCTACACT
ACTGAAGCCT ACATCACGGC CTTAGCAGGA TTTATTCAAG CTTTGGAAAT TGAGCGTTTT
TCTCTGGTTG TGCAGGGATT CTTAGGGTCT GTTGGTCTAC AATACGCCTT AAAACATCCC
GAACAAATCG CCAACATAGC TATACTAAAT GCACCAATTT CTACTGACGC TAAACTACCT
TGGAAAATTA AACAAATGGG TCTACCTTTT ATCGGTGACA TGATGACTCA AGACCCATTA
TTAATTGACC GGACTCTCGA AGGTGGTAGC CGTTATCGCA TCGAAGACAA AGATTTAGAT
GTTTATCGTA AACCTTTTTT GAAAACTTCG GCTGTGGGAC GGGCGCTTTT AAATACAATT
CGCAACTTGC AACTCCCCGC AGCCATGACA GAAATCGAAT CTGGTTTTAA ACAATGGCAA
CAACCAATTC TGGTTCAATG GGGTATGATT GACCCCTGGT TGCCTGTAGA AGTAGCACAA
AAGTTTGTTG AGACTGCACC CAATGCTGAA TTAATCAAAC TCAATAACGT CGGTCACTAC
CCACAAGAAC ACTACGATAA AACAATCCTA GAAGACCTTC TGCCTTTTGT GCGCCGTGCT
GAATCTTGA
 
Protein sequence
MSITEHKITV NTLEWFYRES EPVGRSDLLP VLLLHGIPSQ SYSWRNIIPA LAAQGTRAIA 
PDWIGSGFSA KPEKHEFAYT TEAYITALAG FIQALEIERF SLVVQGFLGS VGLQYALKHP
EQIANIAILN APISTDAKLP WKIKQMGLPF IGDMMTQDPL LIDRTLEGGS RYRIEDKDLD
VYRKPFLKTS AVGRALLNTI RNLQLPAAMT EIESGFKQWQ QPILVQWGMI DPWLPVEVAQ
KFVETAPNAE LIKLNNVGHY PQEHYDKTIL EDLLPFVRRA ES