Gene Ava_5037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5037 
Symbol 
ID3678893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6325736 
End bp6326818 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content46% 
IMG OID637720397 
ProductFAD dependent oxidoreductase 
Protein accessionYP_325529 
Protein GI75911233 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.484973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTAG CGATTATTGG CTGTGGCGTA GTTGGTGCGG CGATCGCCTA TGAACTCAGT 
CAAATCCCAG GAATCAAAAT CACAGTTTTT GATAAACAAC GACCCGCCCA AGCTTCTACA
GGCGCAGCCC TTGGTGTTTT AGTAGGCATC ATCAGCCAAA AAATCAAGGG TAAGGCTTGG
CAGATGCGAC AAACTAGCAT CCAACGTTAT GAAACCTTAA TTCCTGAACT GGAAGCTATC
ACAGGGCGGA AAATCCCTTT TAACCGTCAA GGAATTCTCA GTCTGTGCTT AGAAGCAGAA
AAGTTAGAAA GCTGGGAAAA TTTAGCAGCC ATTCGCCACA ACCAAGGCTG GAAATTAGAA
ATTTGGGACA CGAACAAACT CAAACATATC TGTCCCCAAG TTGATCATCC GCAAATTATC
GGCGCTGTCT ACTCTCCACA AGACCGCCAA CTAGACCCCA CAGCTTTGAC TTTAGCTTTA
GTTGAGGCTG CCCAACATAA GGGAGTAACT TTTAAATTTG GTGTGACTGT GTTAGGTTTC
CCCAATACAG AAGCGATTCA ATGCACATCA ATTGAGACAA CAGAAGGTAA AATCACCGCA
GATTGGATAA TTATTGCGGC CGGGTTGGGT TCCACAGCCA TCACAACACA ACTCAATCAA
AAAGTAGATA TTCGTCCCGT GTTGGGACAA GCTTTGCAAG TACGCTTAGA CCATCCATTA
GGGAATCCCG ACTTTCAACC AGCAATTACA GGTAATGATG TGCATATAGT CCCTGTAGGT
GGTGGAGACT ATTGGATAGG TGCAACGGTG GAATTTCCCA CAGATAGCCA TGAAATCCCA
CCCAATCAAG AATTACTGGA ATCAGTCAGA CAACAGGCGA TCGCTTTCTG TCCAGAATTA
GCCACAGCCG AAATCATTCG CACTTGGTCA GGATTGCGCC CGCGCCCCGA AGGTCGCCCC
GCACCAGTTA TTGATGAGTT ACCAGGGTTT AGTAATGTTC TGTTGGCTAC TGGACACTAT
CGCAACGGTG TTTTACTCGC ACCCGCCACG GCAAAGGCAA TTCGTGAGAA GATTTTCAAA
TAG
 
Protein sequence
MDVAIIGCGV VGAAIAYELS QIPGIKITVF DKQRPAQAST GAALGVLVGI ISQKIKGKAW 
QMRQTSIQRY ETLIPELEAI TGRKIPFNRQ GILSLCLEAE KLESWENLAA IRHNQGWKLE
IWDTNKLKHI CPQVDHPQII GAVYSPQDRQ LDPTALTLAL VEAAQHKGVT FKFGVTVLGF
PNTEAIQCTS IETTEGKITA DWIIIAAGLG STAITTQLNQ KVDIRPVLGQ ALQVRLDHPL
GNPDFQPAIT GNDVHIVPVG GGDYWIGATV EFPTDSHEIP PNQELLESVR QQAIAFCPEL
ATAEIIRTWS GLRPRPEGRP APVIDELPGF SNVLLATGHY RNGVLLAPAT AKAIREKIFK