Gene Ava_5033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5033 
Symbol 
ID3678889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6322985 
End bp6323620 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content46% 
IMG OID637720393 
Productisochorismatase hydrolase 
Protein accessionYP_325525 
Protein GI75911229 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.309617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACAT TCAAGTACAA CCGTCTAGAC AAAAATAATG CTGCGGTTTT GCTAGTCGAT 
CACCAAACTG GACTGTTCTC ACTTGTGCGT GATATTGGTG CAGCCGACTT CAAAAATAAT
GTGCTAGCCC TAGCAAGTGC AGCCAAGTTT TTTAACCTAC CTACAGTTTT GACAACTAGC
TTTGAGCAAG GCCCCAATGG AGTCATCATA CCTGAACTGA AGGAAAAGTT TCCAGATGCT
CCCTTTATTC CGCGCCCTGG ACAGATCAAT GCTTGGGACA ACGAGGACTT TGTTAAAGCC
GTAGAAGCAA CAGGTAAGAA GCAATTGATC ATTGCCGGAA TTGTCACCGA TGTGTGTGTT
ACTTTTTGTG CGCTTTCGGC ATTAGAGGCA GGTTATGAGG TGTTTGTTGT CACCGATGCC
TCTGGAACCT TTGATGAAGC CTGTCGCTAT GCAGCATGGG ATCGAATGTC TCGTGCTGGA
GTTCAGTTGG TCAATTGGTT TAGCGTTGTG TGTGAATTGC ACCGTGACTG GCGTAACGAT
ATTGAAGGAC TAGGTAGTCT CTTAGCTGGG TTTATTCCTG ACTACAAAAA CCTGATGACC
AGCTATGCAG CAAACTCAAG TGCTGGATCT CCCTAG
 
Protein sequence
MSTFKYNRLD KNNAAVLLVD HQTGLFSLVR DIGAADFKNN VLALASAAKF FNLPTVLTTS 
FEQGPNGVII PELKEKFPDA PFIPRPGQIN AWDNEDFVKA VEATGKKQLI IAGIVTDVCV
TFCALSALEA GYEVFVVTDA SGTFDEACRY AAWDRMSRAG VQLVNWFSVV CELHRDWRND
IEGLGSLLAG FIPDYKNLMT SYAANSSAGS P