Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_5033 |
Symbol | |
ID | 3678889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 6322985 |
End bp | 6323620 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637720393 |
Product | isochorismatase hydrolase |
Protein accession | YP_325525 |
Protein GI | 75911229 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.309617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACAT TCAAGTACAA CCGTCTAGAC AAAAATAATG CTGCGGTTTT GCTAGTCGAT CACCAAACTG GACTGTTCTC ACTTGTGCGT GATATTGGTG CAGCCGACTT CAAAAATAAT GTGCTAGCCC TAGCAAGTGC AGCCAAGTTT TTTAACCTAC CTACAGTTTT GACAACTAGC TTTGAGCAAG GCCCCAATGG AGTCATCATA CCTGAACTGA AGGAAAAGTT TCCAGATGCT CCCTTTATTC CGCGCCCTGG ACAGATCAAT GCTTGGGACA ACGAGGACTT TGTTAAAGCC GTAGAAGCAA CAGGTAAGAA GCAATTGATC ATTGCCGGAA TTGTCACCGA TGTGTGTGTT ACTTTTTGTG CGCTTTCGGC ATTAGAGGCA GGTTATGAGG TGTTTGTTGT CACCGATGCC TCTGGAACCT TTGATGAAGC CTGTCGCTAT GCAGCATGGG ATCGAATGTC TCGTGCTGGA GTTCAGTTGG TCAATTGGTT TAGCGTTGTG TGTGAATTGC ACCGTGACTG GCGTAACGAT ATTGAAGGAC TAGGTAGTCT CTTAGCTGGG TTTATTCCTG ACTACAAAAA CCTGATGACC AGCTATGCAG CAAACTCAAG TGCTGGATCT CCCTAG
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Protein sequence | MSTFKYNRLD KNNAAVLLVD HQTGLFSLVR DIGAADFKNN VLALASAAKF FNLPTVLTTS FEQGPNGVII PELKEKFPDA PFIPRPGQIN AWDNEDFVKA VEATGKKQLI IAGIVTDVCV TFCALSALEA GYEVFVVTDA SGTFDEACRY AAWDRMSRAG VQLVNWFSVV CELHRDWRND IEGLGSLLAG FIPDYKNLMT SYAANSSAGS P
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