Gene Ava_5030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5030 
Symbol 
ID3678886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6317724 
End bp6318548 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content51% 
IMG OID637720390 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_325522 
Protein GI75911226 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.414449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAA TCACAACCCA AGACGGTACA AATATTTATT ACAAAGACTG GGGGGTAGGA 
AAGCCCGTTG TTTTCAGCCA CGGCTGGCCG TTGAATGCTG ATAGTTGGGA AGCTCAGATG
CTTTTTCTCG CAGACCACGG ATTTCGCTGC ATTGCTCACG ATCGCCGTGG TCATGGGCGC
TCAAGCCAAT CTTGGGAAGG GAACGAGATG GATACCTATG CCGACGACCT TGCCGCACTG
ATGGAAATCC TAGACCTAAA TGGGGCAACG GTGATCGGCT TCTCTACCGG CGGTGGTGAA
GTAGCTCGCT ATATTGGTCG CTACGGTACA GCACGAGTCG CCAAAGCTGC GCTGATTTCT
GCCGTTCCGC CACTGATGCT GAAAACAGAG AATAATCCTA ATGGACTACC CATCGAAGTG
TTCGACGGGC TTCGTGCTGG TTCCTTGGCT GACCGATCGC AACTCTACAA GGATCTTGCC
AGTGGCCCAT TCTTTGGCTT TAATCGTCCG GGTGCCAAAG TCTCACAAGG CATGATCGAC
TGGTTTTGGC TCCAAGGAAT GCAGGCGGGT CACAAAAACA CCTTCGACTG TATCAAGGCA
TTCTCGGAAA CCGACTTCAC CGAGGATCTG AAAAAGTTCG ACGTACCAAC GCTGATAATC
CACGGCGATG ATGACCAAAT TGTGCCGATT GGTGCTGCGG CGATCGCTGC TGCAAAATTA
GTGAAGAATG CTACCCTGAA AATCTACCCT GGCGCACCCC ACGGACTGAC GAATACGCAC
CAAGATCAAC TCAACACCGA CCTACTATCG TTTCTTAAAG AATAG
 
Protein sequence
MSTITTQDGT NIYYKDWGVG KPVVFSHGWP LNADSWEAQM LFLADHGFRC IAHDRRGHGR 
SSQSWEGNEM DTYADDLAAL MEILDLNGAT VIGFSTGGGE VARYIGRYGT ARVAKAALIS
AVPPLMLKTE NNPNGLPIEV FDGLRAGSLA DRSQLYKDLA SGPFFGFNRP GAKVSQGMID
WFWLQGMQAG HKNTFDCIKA FSETDFTEDL KKFDVPTLII HGDDDQIVPI GAAAIAAAKL
VKNATLKIYP GAPHGLTNTH QDQLNTDLLS FLKE