Gene Ava_5026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5026 
Symbol 
ID3678882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6313727 
End bp6314518 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content41% 
IMG OID637720386 
Producthypothetical protein 
Protein accessionYP_325518 
Protein GI75911222 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0908979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.879248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT TCTTATTGCC TCTTTTCAGC TTTCTAGTTG GTATAGTTGT TGGTTTAACG 
GGAATTGGTG GTGCTTCTCT CATTACCCCA ATGTTGATTT TCGCTTTTCA AGTACCACCT
GCCGTAGCAG TAAGTTCTGA TGTGGTGGCG GCGACGTTAA TGAAAGTCAT TGGTAGCGTA
AAACATTGGC AGCAACAAAC CGTCGATAGA GAAGTGGTGA AATGGTTGGC ATTGGGGAGT
GTTCCTGGTT CTTTGCTGGG AGTAGGAATA CTGCACCTGA TAAAACTGAA AGCCGAACAT
AGCTTAAATG ACATTATGCT GCATTTGTTG GGTGTGACGA TTTTATCAGT CACTATTTTG
GCATTAATGC AAATGCTGCT ATTGACCTTC TTTCCACAGT TACAACTACC TGAACTACCC
AAATTTGACT TAACTACTCA GCTAGGACGC TTACAGACGG TAATTGTAGG AGCGTTTTTA
GGCTGTGTTG TAGGTCTGAC AAGTGTTGCT TCTGGTTCAT TGTTTGCCTT GGTACTGATT
GCATTTTTCC GGTTGGATGC GCGGAAATTA GTCGGTACAG ATATTTCCCA AGCCGCAATT
CTGTTAATTT TCACGGCTGT TGGACATCTC ACCTTGGGAA CAGTTGATTG GAATCTCGTA
TTACCAATAT GGCTTGGCTC AGTACCAGGA GTATTAATAG GAGCTAAAGT CTGTCAAATT
GCGCCACAGA AACCACTACG ATTTATGGTT TACTTTATAT TAATGTTGGT GAGTTTAAAG
TTGGTTTATT AG
 
Protein sequence
MDFFLLPLFS FLVGIVVGLT GIGGASLITP MLIFAFQVPP AVAVSSDVVA ATLMKVIGSV 
KHWQQQTVDR EVVKWLALGS VPGSLLGVGI LHLIKLKAEH SLNDIMLHLL GVTILSVTIL
ALMQMLLLTF FPQLQLPELP KFDLTTQLGR LQTVIVGAFL GCVVGLTSVA SGSLFALVLI
AFFRLDARKL VGTDISQAAI LLIFTAVGHL TLGTVDWNLV LPIWLGSVPG VLIGAKVCQI
APQKPLRFMV YFILMLVSLK LVY