Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_5026 |
Symbol | |
ID | 3678882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6313727 |
End bp | 6314518 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637720386 |
Product | hypothetical protein |
Protein accession | YP_325518 |
Protein GI | 75911222 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0908979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.879248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTT TCTTATTGCC TCTTTTCAGC TTTCTAGTTG GTATAGTTGT TGGTTTAACG GGAATTGGTG GTGCTTCTCT CATTACCCCA ATGTTGATTT TCGCTTTTCA AGTACCACCT GCCGTAGCAG TAAGTTCTGA TGTGGTGGCG GCGACGTTAA TGAAAGTCAT TGGTAGCGTA AAACATTGGC AGCAACAAAC CGTCGATAGA GAAGTGGTGA AATGGTTGGC ATTGGGGAGT GTTCCTGGTT CTTTGCTGGG AGTAGGAATA CTGCACCTGA TAAAACTGAA AGCCGAACAT AGCTTAAATG ACATTATGCT GCATTTGTTG GGTGTGACGA TTTTATCAGT CACTATTTTG GCATTAATGC AAATGCTGCT ATTGACCTTC TTTCCACAGT TACAACTACC TGAACTACCC AAATTTGACT TAACTACTCA GCTAGGACGC TTACAGACGG TAATTGTAGG AGCGTTTTTA GGCTGTGTTG TAGGTCTGAC AAGTGTTGCT TCTGGTTCAT TGTTTGCCTT GGTACTGATT GCATTTTTCC GGTTGGATGC GCGGAAATTA GTCGGTACAG ATATTTCCCA AGCCGCAATT CTGTTAATTT TCACGGCTGT TGGACATCTC ACCTTGGGAA CAGTTGATTG GAATCTCGTA TTACCAATAT GGCTTGGCTC AGTACCAGGA GTATTAATAG GAGCTAAAGT CTGTCAAATT GCGCCACAGA AACCACTACG ATTTATGGTT TACTTTATAT TAATGTTGGT GAGTTTAAAG TTGGTTTATT AG
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Protein sequence | MDFFLLPLFS FLVGIVVGLT GIGGASLITP MLIFAFQVPP AVAVSSDVVA ATLMKVIGSV KHWQQQTVDR EVVKWLALGS VPGSLLGVGI LHLIKLKAEH SLNDIMLHLL GVTILSVTIL ALMQMLLLTF FPQLQLPELP KFDLTTQLGR LQTVIVGAFL GCVVGLTSVA SGSLFALVLI AFFRLDARKL VGTDISQAAI LLIFTAVGHL TLGTVDWNLV LPIWLGSVPG VLIGAKVCQI APQKPLRFMV YFILMLVSLK LVY
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