Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_5023 |
Symbol | |
ID | 3679036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6310933 |
End bp | 6311685 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637720383 |
Product | cadmium resistance transporter |
Protein accession | YP_325515 |
Protein GI | 75911219 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4300] Predicted permease, cadmium resistance protein |
TIGRFAM ID | [TIGR00779] cadmium resistance transporter (or sequestration) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0257452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.407908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC TACTGACTGC TATTTCTACA GGATTCACGG CTTTTGTGGC TACTAATCTC GACGATATTG TCGTCCTGTC ACTGTTTTTC TCACAAATAA ATGCTTGTTT TCGCCGTCGC CATATATTTA TCGGTCAGTA TTTGGGTTTT AGTGCCTTAG TAGTTGCCAG TTTGCCTAGC TTCTTTGGCA GATTCATCAT CCCAGGGTCT TGGATTGGTC TACTGGGTAT TGCGCCGATA ATTATTGGCA TCAATCGCTT ACTAAATCAA GAGACTAGCG ACACAGAGGA TTTAAATACT CTTGAATCTT CGCCGTCTTG GTGGAACAAT TTTCTTTCAC CCCAAACCTA TGGTGTAGCA GCAGTCACAA TTGCGAATGG TAGTGACAAC ATTAGTATCT ATATGCCCAT GTTTGCTACG AATACATGGG ATAACTTACT GGTAATTTTG CTAGTTTTCT TTGTGATGGT AGGTGTGTGG TGTTATCTAG CCTATCACTT AACTCAGATC AAGGCGATCG CTTCTGCAAT TACCCACTAT GGTAATTCTT TAGTTCCCTT TCTTTTAATA GGATTAGGTG TTTCCATTTT TATAGAAAGC CAAACGATAG AAACTCCCAT TTTACTTTTC ATAATCTGTG TAAGCATTGG GTCTTACCTG TTAATTTTAA GCAAGAATAT TTGGCGAGTA AATTATAGAT TCTCCTTGGA AGCACCTGAA GCAGAAGTTA TACCTGGAAT TAAACAAAAA TGA
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Protein sequence | MSELLTAIST GFTAFVATNL DDIVVLSLFF SQINACFRRR HIFIGQYLGF SALVVASLPS FFGRFIIPGS WIGLLGIAPI IIGINRLLNQ ETSDTEDLNT LESSPSWWNN FLSPQTYGVA AVTIANGSDN ISIYMPMFAT NTWDNLLVIL LVFFVMVGVW CYLAYHLTQI KAIASAITHY GNSLVPFLLI GLGVSIFIES QTIETPILLF IICVSIGSYL LILSKNIWRV NYRFSLEAPE AEVIPGIKQK
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