Gene Ava_5023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5023 
Symbol 
ID3679036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6310933 
End bp6311685 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content39% 
IMG OID637720383 
Productcadmium resistance transporter 
Protein accessionYP_325515 
Protein GI75911219 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4300] Predicted permease, cadmium resistance protein 
TIGRFAM ID[TIGR00779] cadmium resistance transporter (or sequestration) family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0257452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.407908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TACTGACTGC TATTTCTACA GGATTCACGG CTTTTGTGGC TACTAATCTC 
GACGATATTG TCGTCCTGTC ACTGTTTTTC TCACAAATAA ATGCTTGTTT TCGCCGTCGC
CATATATTTA TCGGTCAGTA TTTGGGTTTT AGTGCCTTAG TAGTTGCCAG TTTGCCTAGC
TTCTTTGGCA GATTCATCAT CCCAGGGTCT TGGATTGGTC TACTGGGTAT TGCGCCGATA
ATTATTGGCA TCAATCGCTT ACTAAATCAA GAGACTAGCG ACACAGAGGA TTTAAATACT
CTTGAATCTT CGCCGTCTTG GTGGAACAAT TTTCTTTCAC CCCAAACCTA TGGTGTAGCA
GCAGTCACAA TTGCGAATGG TAGTGACAAC ATTAGTATCT ATATGCCCAT GTTTGCTACG
AATACATGGG ATAACTTACT GGTAATTTTG CTAGTTTTCT TTGTGATGGT AGGTGTGTGG
TGTTATCTAG CCTATCACTT AACTCAGATC AAGGCGATCG CTTCTGCAAT TACCCACTAT
GGTAATTCTT TAGTTCCCTT TCTTTTAATA GGATTAGGTG TTTCCATTTT TATAGAAAGC
CAAACGATAG AAACTCCCAT TTTACTTTTC ATAATCTGTG TAAGCATTGG GTCTTACCTG
TTAATTTTAA GCAAGAATAT TTGGCGAGTA AATTATAGAT TCTCCTTGGA AGCACCTGAA
GCAGAAGTTA TACCTGGAAT TAAACAAAAA TGA
 
Protein sequence
MSELLTAIST GFTAFVATNL DDIVVLSLFF SQINACFRRR HIFIGQYLGF SALVVASLPS 
FFGRFIIPGS WIGLLGIAPI IIGINRLLNQ ETSDTEDLNT LESSPSWWNN FLSPQTYGVA
AVTIANGSDN ISIYMPMFAT NTWDNLLVIL LVFFVMVGVW CYLAYHLTQI KAIASAITHY
GNSLVPFLLI GLGVSIFIES QTIETPILLF IICVSIGSYL LILSKNIWRV NYRFSLEAPE
AEVIPGIKQK