Gene Ava_5008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5008 
Symbol 
ID3679021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6295456 
End bp6295797 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content42% 
IMG OID637720368 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_325500 
Protein GI75911204 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.308235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.685027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGC TTGTCAGCCA TAAACTCTGT ATCAATTGCA ATTTGTGCGT CCAAGTTTGT 
CCTACTAATG TCTTTGACTC TGTACCTGAC CAACCACCCA TAATCGCCCG CAAGGAAGAC
TGTCAAACTT GTTTTATGTG TGAGGCATAT TGTCCTGCGG ATGCGCTCTA TGTTGCACCC
CAATCTCATA CAGATATGGA AATCAATGAG GATGATTTAA TTGAAAGTGG CATCATGGGT
GAATATCGTC GCCTCTTAGG CTGGGGATAT GGTAGAAAAA GCAATAGTGA ATTGGATACA
GCTCATAAAC TGCGCCAATT ACCCCGTCCT TATCAAAGTT AA
 
Protein sequence
MIELVSHKLC INCNLCVQVC PTNVFDSVPD QPPIIARKED CQTCFMCEAY CPADALYVAP 
QSHTDMEINE DDLIESGIMG EYRRLLGWGY GRKSNSELDT AHKLRQLPRP YQS