Gene Ava_5006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5006 
Symbol 
ID3679058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6292465 
End bp6293688 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content44% 
IMG OID637720366 
Productglutathione S-transferase-like protein 
Protein accessionYP_325498 
Protein GI75911202 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0061879 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.748916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTC AAAACACGGT ATCAGGTTGG GAAGAACTTT TAGCAACTGC TAGAAACCAT 
ACTTCTGCGC GTCGGGTCAA AAGGCCAGGG CAATCTCCTT CTACTGCACC CATCCCCAGT
AGTTTACATA AACTCCCGCC AAATACAGAA CCACCAGTCC TGCTTTACCG AGATACTAAT
TCCTGGTGTC CTTTCTGCGA GCGAGTTTGG TTCGCACTGG AAGAAAAAGA AATTCCCTTT
GCTACAGAGT TTATTGATTT AAGTAACAAA CCCAAATGGT ATACCGATTT AGTTCCGACA
ACGCTTGTCC CAGGGGCAAA AATTGAGGGG AAATTAGTAT ATGAATCCAA AGATATTCTC
TTGGCTTTAG AAGAAAAGTT TCCTCATCCT GCCTTATTAC CAGAAAATCC AGAGGAAAAC
GCTGTTGCTA GACAGTTGGT TGAGGAGGCG GATACTAATG GTTTTAGGAG TATTGCTTTC
AAATTCCTGA GAGAAGCGCC TGTAGATGTT GATGAGTTGG CAAAGTTACA GGCAGAGTTT
GAAGCTCAGT TAGATGAACT TGAGCAAACT TTGGCGAAGT ATCCCGGCCC TTACTTTGTT
AGTACGTTTA GCTTGGTAGA TATTATGTAT AGCCCCCATC TGGATAGATT GGCGGCTAAT
TTACCTGTGT ATCGGGGGTA TCACATCAAA GGAAATCCGC GTTTTCCTCG GATTAATGCT
TGGTTTAACG CACTGAATCA GCGTCCGGCT TATCACAGGG TGAAGTCGGA TAATATTACC
AATAATTTAC TGTTGCGTCG CCGATGGGGA GTGGAACCCA TTGGTAATCC TTTACCTCTG
GATGTGGCCG ATAGTGAGAA AATTCAATAT AGAGCCGAAG CGGCTGAGAG ATTGAGCGAT
AATCGGGAAG TGGCGATCGC AGATATTATC AAAAACTCTG GAGTCCAAGC TTTAGCCGCA
GATGGTGACT TTACCACAGT TAAAGAGGCA GTTGATTTTC ATTTGCGACA ACTGGCTGAT
TATTTACTTC ATGGTAATGG TGAAACTTTA GCCGGTGGTC GGACAGGTGG TAAAAATAGC
ACTGTTGATC CTATTTTCGC TGCTGTGGGA GCGATCGCTT TTGCATATTT GAGAAATCGC
ATTTGCGCTC CTCGTGATAT GAGTGCTGGT GCAGCAACGG CGTTTCGAGC GGCAATTGAT
AAATTGTTGG CTTCTGTTTA TTAA
 
Protein sequence
MSIQNTVSGW EELLATARNH TSARRVKRPG QSPSTAPIPS SLHKLPPNTE PPVLLYRDTN 
SWCPFCERVW FALEEKEIPF ATEFIDLSNK PKWYTDLVPT TLVPGAKIEG KLVYESKDIL
LALEEKFPHP ALLPENPEEN AVARQLVEEA DTNGFRSIAF KFLREAPVDV DELAKLQAEF
EAQLDELEQT LAKYPGPYFV STFSLVDIMY SPHLDRLAAN LPVYRGYHIK GNPRFPRINA
WFNALNQRPA YHRVKSDNIT NNLLLRRRWG VEPIGNPLPL DVADSEKIQY RAEAAERLSD
NREVAIADII KNSGVQALAA DGDFTTVKEA VDFHLRQLAD YLLHGNGETL AGGRTGGKNS
TVDPIFAAVG AIAFAYLRNR ICAPRDMSAG AATAFRAAID KLLASVY