Gene Ava_4997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4997 
Symbol 
ID3679049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6281089 
End bp6281763 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content37% 
IMG OID637720357 
Productcadmium resistance transporter 
Protein accessionYP_325489 
Protein GI75911193 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4300] Predicted permease, cadmium resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000622218 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.209664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGC TAATTGGTAC ATCATTGATT GCAATATCTG TGGCTTTTGC AACAACATTT 
GATGATAATT TATATTTGAC AGCTTTTTTT GGCAAGGTAA ATCATGCCTT TCGTCCAAAA
CATATTATTA TTGGTGAATT TGTGGGATTT ACTATATTGG TAACAGCTAG TCTCCCTGGT
TTTTTCGGTG GTCTAGTCCT TCCAGAAGCA TGGGTTGGAT TACTAGGGAT TCTGCCAATA
ATAATTGGTA TCAGCCATCT GATGAATCAG GAAGAGGAAG AAGATAGTTT ACAAGCTGTA
TCAGTCAATT TTGATTATTC AGTCAAATCC CAACGCCATA AAAAAACATT ATTCGCAACC
CTCAAAGATC CTCAAACCTA CCGTGTATCT GCCGTTACCG TTGCTAATGG TGGAAATAAT
ATTGGTATTT ATGTCCCTTT ATTTGCTAGC AGCAATGTTC CTAGTTTGGC AGTAATTGTA
TGTATTTGCT ATTTAGCAAT TGGAATGTGG TGTTTTCTCT CCTACAACCT CACTCGCAAC
CCTTTCATGG CTTCGGTGCT AATTCGCTAT GGTCGGAAGG TGTTTCCGTT TATCTTAATA
TATTTGGGGT TATCTATCAT CGTTAAAAGC GGAACTTATC AACTTGTACC TAATTTGGCA
ATGTTTTTCC AATAA
 
Protein sequence
MDWLIGTSLI AISVAFATTF DDNLYLTAFF GKVNHAFRPK HIIIGEFVGF TILVTASLPG 
FFGGLVLPEA WVGLLGILPI IIGISHLMNQ EEEEDSLQAV SVNFDYSVKS QRHKKTLFAT
LKDPQTYRVS AVTVANGGNN IGIYVPLFAS SNVPSLAVIV CICYLAIGMW CFLSYNLTRN
PFMASVLIRY GRKVFPFILI YLGLSIIVKS GTYQLVPNLA MFFQ