| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4989 |
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| Symbol | |
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| ID | 3679039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6269391 |
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| End bp | 6271646 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637720347 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_325481 |
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| Protein GI | 75911185 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA TCGCTATTAG TTCCCCAACC GACCTTAGCC TTCCAGAATG GCTGAAGCAA
TGTTTGCGGG ATTCATCAAC ATATGGCAGC AAGGCAGAAA ATGACCGAAT GTGTAGTGAT
AACACGTTAA TCTGTCGGGC ATTTGATTTT GCTTACCAAC TGCATCACGG ACAATATCGC
AAATCTGGAG AACTATATAT TAGTCACCCC ATCGCTGTAG CCGGGCTGCT GCGGGACTTA
GGGGGTAGTC CTGCTATGAT AGCAGCTGGA TTTCTTCATG ATGTAGTCGA AGATACAGAT
GTCACAATTG AGGAAATAGA AGAGCGTTTC GGCCCGGAAG TCAAGCAGTT GGTGGAAGGT
GTCACCAAGC TTTCTAAAAT CAATTTTAAA AGCAAAACCG AAAGTCAAGC GGAAAACTTC
CGGCGGATGT TTTTGGCGAT GGCGCAAGAT ATTCGGGTAA TTGTGGTGAA GTTAGCAGAC
CGTTTGCATA ATATGCGAAC TCTGCAATAT ATGTCAGAAG ATAGCCGTCG ACGTTCAGCC
CAAGAAACAC GAGATATCTT TGCACCTTTA GCCAATCGCT TGGGGATCTG GCGAATTAAG
TGGGAATTAG AAGATTTAGC CTTTAAGAAT TTAGAGCCGG AAGCTTTTCG GCAAATGCAA
AAGTATGTTT CCGAAAAGCG GGACGCACGG GAAGAGAAAT TAGCCAAAGC TACAGCAATT
TTACGCGATC GCCTCCAGCA AGCAGGAATT CGCTGTCTAG ATATCAGTGG TCGCCCTAAG
CATCTTTACA GTATTTACCA AAAGATGCAC CGACAGCAAA AAGAATTTAA TGAAATTTAT
GATCTAGCAG CACTGCGGAT TATTGTCGAA ACCAATGAGG AATGTTACCG GGCTTTAGCT
GTAGTACATG ACGCTTTTCG CCCGATCCCC GGCAGATTTA AAGATTATAT CGGCTTACCC
AAACCCAACC GTTATCAATC TCTGCACACA GGGGTTATCG GTTTAACTGG TCGTCCTTTG
GAAGTGCAGA TTCGGACAAT GGAAATGCAC CGCATCGCCG AATACGGGAT CGCCGCCCAT
TGGAAGTATA AAGAAACTGG TGGTTCTAAC AGCCTGATAA CAACATCAGA TGAAAAGTTT
ACTTGGTTGC GTCAATTGTT GGAATGGCAA AGTGACCTCA AAGACGCACA AGAATATCTC
GATAGCGTTA AAGATAACTT ATTTGAAGAT GATGTTTATG TCTTCACGCC CAAAGGCGAT
GTAATTCCTT TAAGTCCTGG GGCTACAACT ATAGATTTTG CCTATCATAT TCATACAGAA
GTTGGTAATC ACTGTGCCGG GGCGCGAGTT AACGGACGCA TGGTTCCTTT ATCAACTAGA
CTAAGCAATG GCGATATTGT AGAAATTATT ACTCAAAAGA ATAGCCATCC CAGCTTAGAT
TGGCTCAACT TTGTGAGAAC TTCCGCCGCC AAGTATCGAA TTAAACAATG GTACAAGCGA
TCGCGCCGGG AAGAAAATGT GGCTCGTGGT CGAGAATTAT TAGAAAAAGA ATTGGGGAAA
ACTGGCTTAG ATAGTCTTTT AAAGTCGGAT GCAATGCGGA CTGTTTCCGA AAAATGTAAT
TATCACAGTG CTGAAGATTT ACTCGCAGGT ATGGGTTACG GCGAAGTCAC ACTCAACTTG
GTGTTAAATC GCTGGCGAGA AGTGGTTAAA TCCCAACAGC CGGTAGTAGA TACGCCCATA
TTATTGCCCA AAGAACCATC TACCGCCAAA GCACCCACAC CCATCACCCG TGCAACAGAT
TCACCAATTG TGGGTGTAGA AGGATTGGTA TATCACCTCG CTGGTTGTTG TACACCAATC
CCCGGTGAAC CAATTATTGG CGCAGTAACA CGGGGTAGGG GAATTTCCAT CCATCGCCAA
GGCTGTCATA ATTTAGAGAC AGTGGAATGC GATCGCCTAG TCCCCGTTAG TTGGAACCCA
GTCGCAGAAA ATAGAGGTCG TCCCCAAACT TACCCAGTCA ATGTTCAAAT AGAAGCCCTA
GACCGGGTGG GAGTATTAAA AGATATCTTG TCTCGACTGA GTGACCAAGG GATCAACGTA
CGTTACGCCC AGGTAAAAAC AGCAGTTAAT CAACCAGCAT TAATAGACTT AGGTATAGAT
ATACGCGATC GCCCACAACT AGAACAAGTG TTCATCCAAA TCAAAAAAAT GAGCGATATT
CTCAATATTC GCCGTGTAGG ACAAATTGAT GAGTGA
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| Protein sequence | MSSIAISSPT DLSLPEWLKQ CLRDSSTYGS KAENDRMCSD NTLICRAFDF AYQLHHGQYR
KSGELYISHP IAVAGLLRDL GGSPAMIAAG FLHDVVEDTD VTIEEIEERF GPEVKQLVEG
VTKLSKINFK SKTESQAENF RRMFLAMAQD IRVIVVKLAD RLHNMRTLQY MSEDSRRRSA
QETRDIFAPL ANRLGIWRIK WELEDLAFKN LEPEAFRQMQ KYVSEKRDAR EEKLAKATAI
LRDRLQQAGI RCLDISGRPK HLYSIYQKMH RQQKEFNEIY DLAALRIIVE TNEECYRALA
VVHDAFRPIP GRFKDYIGLP KPNRYQSLHT GVIGLTGRPL EVQIRTMEMH RIAEYGIAAH
WKYKETGGSN SLITTSDEKF TWLRQLLEWQ SDLKDAQEYL DSVKDNLFED DVYVFTPKGD
VIPLSPGATT IDFAYHIHTE VGNHCAGARV NGRMVPLSTR LSNGDIVEII TQKNSHPSLD
WLNFVRTSAA KYRIKQWYKR SRREENVARG RELLEKELGK TGLDSLLKSD AMRTVSEKCN
YHSAEDLLAG MGYGEVTLNL VLNRWREVVK SQQPVVDTPI LLPKEPSTAK APTPITRATD
SPIVGVEGLV YHLAGCCTPI PGEPIIGAVT RGRGISIHRQ GCHNLETVEC DRLVPVSWNP
VAENRGRPQT YPVNVQIEAL DRVGVLKDIL SRLSDQGINV RYAQVKTAVN QPALIDLGID
IRDRPQLEQV FIQIKKMSDI LNIRRVGQID E
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