Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4979 |
Symbol | |
ID | 3679088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 6261523 |
End bp | 6261990 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637720337 |
Product | cupin region |
Protein accession | YP_325471 |
Protein GI | 75911175 |
COG category | [S] Function unknown |
COG ID | [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATCG ACCCTAACAA TGTGCCTATG GAAAGAGGCA CAAATTACCC CGATGCTTTC AAAGCGATGG TTGCAGGACG GATACGACAA AGGTTGGGCA ACTTTGCTGG GTTGAAGAAT TTTGGAGTCA ACTTAGTGCA GTTAGAGCCA GGGAGTTTTT CTGCTTTAAG ACACTGGCAT TCTCATCAAG ACGAGTTCAT TTATATATTG GCAGGTGAAC TGACTTTAAT TACAGATGCT GGAGAAGAAA TTCTGACACC AGGAATGGCG GCTGGATTTC CCGCAGGTGA AGCCAATGGA CATCATTTAG TCAATCGCTC TGCGGTGGTT GGGGTGTATT TAGAAGTAGG CGATCGCACC CCCAATGACC AAGGTTTTTA TCCCGATGTA CCAGATTTGA TGACACCACC TAGTCCTGAT GGCAAATCCA GACAATTTAT TCACCAAGAT GGAACGCTAT ATGAATAG
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Protein sequence | MIIDPNNVPM ERGTNYPDAF KAMVAGRIRQ RLGNFAGLKN FGVNLVQLEP GSFSALRHWH SHQDEFIYIL AGELTLITDA GEEILTPGMA AGFPAGEANG HHLVNRSAVV GVYLEVGDRT PNDQGFYPDV PDLMTPPSPD GKSRQFIHQD GTLYE
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