Gene Ava_4979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4979 
Symbol 
ID3679088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6261523 
End bp6261990 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content45% 
IMG OID637720337 
Productcupin region 
Protein accessionYP_325471 
Protein GI75911175 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATCG ACCCTAACAA TGTGCCTATG GAAAGAGGCA CAAATTACCC CGATGCTTTC 
AAAGCGATGG TTGCAGGACG GATACGACAA AGGTTGGGCA ACTTTGCTGG GTTGAAGAAT
TTTGGAGTCA ACTTAGTGCA GTTAGAGCCA GGGAGTTTTT CTGCTTTAAG ACACTGGCAT
TCTCATCAAG ACGAGTTCAT TTATATATTG GCAGGTGAAC TGACTTTAAT TACAGATGCT
GGAGAAGAAA TTCTGACACC AGGAATGGCG GCTGGATTTC CCGCAGGTGA AGCCAATGGA
CATCATTTAG TCAATCGCTC TGCGGTGGTT GGGGTGTATT TAGAAGTAGG CGATCGCACC
CCCAATGACC AAGGTTTTTA TCCCGATGTA CCAGATTTGA TGACACCACC TAGTCCTGAT
GGCAAATCCA GACAATTTAT TCACCAAGAT GGAACGCTAT ATGAATAG
 
Protein sequence
MIIDPNNVPM ERGTNYPDAF KAMVAGRIRQ RLGNFAGLKN FGVNLVQLEP GSFSALRHWH 
SHQDEFIYIL AGELTLITDA GEEILTPGMA AGFPAGEANG HHLVNRSAVV GVYLEVGDRT
PNDQGFYPDV PDLMTPPSPD GKSRQFIHQD GTLYE