Gene Ava_4970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4970 
Symbol 
ID3679079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6252192 
End bp6252881 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content44% 
IMG OID637720328 
Productphosphoribosyltransferase 
Protein accessionYP_325462 
Protein GI75911166 
COG category[R] General function prediction only 
COG ID[COG1926] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTTA AAGACCGGAC AGTAGCAGGT CAAGTTTTGG CTAAAAAATT AGCAGATTAT 
GCTAATCGCT CCAATGTGTT GGTGTTAGCC TTACCTAGAG GTGGTGTACC TGTTGGTTTT
GAAGTGGCTA GGGCTTTAAA TGCTCCCTTA GATGTGCTGG TAGTGCGTAA GCTGGGTGTA
CCGGACAATG AAGAATTAGC AATGGGGGCG TTAGCGAAGC TCCCCGGAAC GGGGTTCGCT
TCTGGTGGTG TACGGATACT AAATCAAAGT ATTGTCAATG ATATTCAAAT CTCTGATGAA
GTAATTGCCA GAGTTGCAGT CCAAGAAGAA AGGGAACTCG AAAGAAGGGA AAGTATGTAT
CGAGGCGATC GCCCTTTTCC CAATTTGCAA GGACAAACCG TGATTTTAGT AGATGATGGT
TTAGCCACTG GTGCAACTAT GTGGGCTGCC ATAATTGCTG TCCGACAACA ACAACCCAAA
GAAATTGTGA TTGCTGTGCC GGTTGCTGCA CCTGAAACCT GTGATGAGAT GCAAAACAAG
GTGGAAAAAA TCGTCTGCGC CAATACACCT AGTCCATTTT ATAGCGTAGG TATGTGGTAT
GAGAAGTTTC CACAAACTAC GGATGATGAA GTTAGAGAGT TATTAAACAA AGCTAACAAT
AACCATGAGC CATTATTGTC TGGGAATTAG
 
Protein sequence
MLFKDRTVAG QVLAKKLADY ANRSNVLVLA LPRGGVPVGF EVARALNAPL DVLVVRKLGV 
PDNEELAMGA LAKLPGTGFA SGGVRILNQS IVNDIQISDE VIARVAVQEE RELERRESMY
RGDRPFPNLQ GQTVILVDDG LATGATMWAA IIAVRQQQPK EIVIAVPVAA PETCDEMQNK
VEKIVCANTP SPFYSVGMWY EKFPQTTDDE VRELLNKANN NHEPLLSGN