Gene Ava_4968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4968 
Symbol 
ID3679077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6249465 
End bp6250832 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content44% 
IMG OID637720326 
Producthypothetical protein 
Protein accessionYP_325460 
Protein GI75911164 
COG category[S] Function unknown 
COG ID[COG4402] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT TTAAATTACT TGTTCCATTG TTGTTGGTAA TAGTGGCCGT GCTGTGCTTT 
GCACCTGCGG CTTGGGCATT TTGTGGATTT TATGTGGCTA AGGCTGATGC CAAATTGTAT
AACAAAGCGT CTCAGGTGGT GTTGGCACGG GATGGCGATC GCACTGTGTT GACTATGGCT
AATGATTACC AGGGCGAAGT TAAAGATTTT GCGATGGTTG TACCCGTACC GACGGTCATT
AAAAAAGAGC AGGTGCGTGT GGCTGAACCC AAAATTATTG AGCGGTTGGA TGCTTTTAGT
GCGCCGCGTT TGGTGGAATA TTTCGACTCT AATCCTTGCG CTGTCGAGGA TTTTGCACTA
GAGGCACTAC CTGCACCTAG CGCCGCCCTC AATGAATCTG GGGCTGCAAG AAGAAGGGGC
GATCGTAGTT TGGGTGTGAC AGTGGAGGCA CGCTTTAATG TTGGAGAATA CGACATTGTG
GTTTTAAGCG CCAAAGAATC CGGTGGCTTG GAAACTTGGC TCAACCGCAA TGGTTACAAA
ATTCCTAGAG GTGCAAAACA GCTACTTAAG CCTTATATTC GCTCCTCAAT GAAGTTCTTT
GTTGCCAAGG TCAATTTAGA TAGATTTGAA CAATCTGGTT ATCAATTTCT CCGCCCACTG
CAAATTGCTT ACAAGTCCTC TAGGTTCATG CTACCTATTC GTTTAGGCAT GATTAACGCT
ACTACAGAGC AAGATTTAAT TGTCTATGTC CTCTCACCTC AAGGTCAGGC GGAAATCACC
AATTATCGGA CAGTAAAAAT CCCCTCTAAC GCCAACATCC CCTTATTTGT GAAATCAGAA
TTTGGCGACT TTTACAAGTC CACTTTCCAA ACGGCATACA CCAAAGAAGG TAAGAAAGTC
GCTTTCCTAG AATATGCCTG GGACATGGGT AGTTGTGACC CCTGTTCTGG TGATCCTTTA
ACTCCAGATG AATTAAAACA GGCTGGTGTG TTTTGGTTAG ATAGAGATGC TTCTAGTCCA
GGTTCTCCTA GCTTTCGCCG ATTTCCTGTA AGTAACGTCT TTATCTCTCG CCTACACGTC
CGCTATACCC GCGACAAGTT CCCCGAAGAT TTGATGTTTC AGGAAACATC TAACCGTGAA
TCTTTTCAAG GAAGATATGT ATTGCAACAT CCATTCACAG GAGAAGCAAA GTGTCAGGCT
GGTAGAGAAT ATAAGCGCTC TTTGCCAAAA CGTTTTGAAC AAGAAGCCCA AACTCTAGCT
AGGCTAACTA ACTGGAATAT TAAAGACATC CGTCAAAAAA TGAAATTGAC AGTAAGTAAT
CTCACACTTC CTTGGTGGGA AAATTTCTTC TCCTGGCTAG GAATATAA
 
Protein sequence
MKRFKLLVPL LLVIVAVLCF APAAWAFCGF YVAKADAKLY NKASQVVLAR DGDRTVLTMA 
NDYQGEVKDF AMVVPVPTVI KKEQVRVAEP KIIERLDAFS APRLVEYFDS NPCAVEDFAL
EALPAPSAAL NESGAARRRG DRSLGVTVEA RFNVGEYDIV VLSAKESGGL ETWLNRNGYK
IPRGAKQLLK PYIRSSMKFF VAKVNLDRFE QSGYQFLRPL QIAYKSSRFM LPIRLGMINA
TTEQDLIVYV LSPQGQAEIT NYRTVKIPSN ANIPLFVKSE FGDFYKSTFQ TAYTKEGKKV
AFLEYAWDMG SCDPCSGDPL TPDELKQAGV FWLDRDASSP GSPSFRRFPV SNVFISRLHV
RYTRDKFPED LMFQETSNRE SFQGRYVLQH PFTGEAKCQA GREYKRSLPK RFEQEAQTLA
RLTNWNIKDI RQKMKLTVSN LTLPWWENFF SWLGI