Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4964 |
Symbol | |
ID | 3679073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6244145 |
End bp | 6244897 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637720322 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_325456 |
Protein GI | 75911160 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACCA TGATTTTTAA TGTTTATCGT ACAGTTGCAG GAAAGATACA ACACAACAAT TTAATAGAGA ATCTCATTGA TAGGATAGTT TTTTCTGGTC AAAAAAAGAT CGCCTGTGGT GAGCGGAATA GCATCACCCA ACGCTTACAA GAAGCTATAA GAGACTTGCA CCACAATCAA ACAATAGAAA CCAGGCTCAA AGCCATTTAT GAGTTAAAGC AAATAGCCCA TGATTATCCA AAACAGCACT GGCTAATCAT GGAAGTTCTC AGTAATTTTA TCCACAATTG TGCTAATAAT ATCTCGTCCG CACAGCTAAC ATCATCAATT GATGCAGAAA TTCAAGCTGC TTTAACTGTG ATTGCTCATA GGGATACAAC GCAAGACCCA GAAAATCAAC AATTAGATTT GAGCCATATC GATATAGCGG GAGCGAATCT CAGCAAAGCC AATCTAGAAA ACGCGAATCT CTATCGTGTT AATCTCGCTG GTGCAAATTT ATTACAAGCC AATCTCTGTG GGGCAATTTT AACCGCCGCC AACCTTTCTG GTGCTAACTT AGCTGGGGCA AATTTATCTG GCTCCATCCT TAGTGCTGCA AACCTAGTCG GTGCAAATCT CACGGGGGCA AATTTGGCAG GAGCAAATTT ATATTTAGCT AATTTACAGG AAGTAATTTT ACATGAGGCA ATATTTAACG GGGCAAATCT ACGAGAAGCA AAATTTACTA CGGCCGACAC TTCTAATAGA TAA
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Protein sequence | MLTMIFNVYR TVAGKIQHNN LIENLIDRIV FSGQKKIACG ERNSITQRLQ EAIRDLHHNQ TIETRLKAIY ELKQIAHDYP KQHWLIMEVL SNFIHNCANN ISSAQLTSSI DAEIQAALTV IAHRDTTQDP ENQQLDLSHI DIAGANLSKA NLENANLYRV NLAGANLLQA NLCGAILTAA NLSGANLAGA NLSGSILSAA NLVGANLTGA NLAGANLYLA NLQEVILHEA IFNGANLREA KFTTADTSNR
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