Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4963 |
Symbol | |
ID | 3679072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6242426 |
End bp | 6243895 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637720321 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_325455 |
Protein GI | 75911159 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCTA ATAAGACAGA CAAATTATGG CGTTGGTTGA TTGGCATAAC CGTGATATTT GCCGTTACTA TAGCTGTGAT TTTATTTGCA TCTTCCAATC CTCAAGGGTT GACCATACAG CAAAAATTAC AATCTAGAAA TCAAGCACTA ACAATTACTG CCATCATTTT TTTGGGCTTG GGTGTAATGA TTAATGCTTA CTATGCAGCC AAGCGCGTAG ATGTCATTAT TAAAAGTGCT TTGGCTGCTG AAAAAAATTT AGAAATCAGC ATTCAAAATG CCAAACTATC TGAAGATAGA TTAATTTCAG AACGTCTGAT GACTGCTGTT ACCCAGCTTG GACACGACAA AATTGAAACC CGCACAGGGG CAATTTATGT GTTAGAAAAA GTCGCCCAAG ATTTTCCCCA AGAACACTGG ACAGTTATCG AAATTCTGAC AGCATTTATT CGAGAGAATG CTTCTGTTCG AGAAGAACAA GAGCAAAAGG AAGATGAATC ACAGCTAACC CCCCTGGGTC GGTATAAGCA AGGCGAGCGC CGAACAACAC AGTTGCGCTT GAATGTTCAT GAAGAATCAC CAAAAATCCG TAGGGATATT CAAGTGGCTC TGACGGTTGT GGGTAGACGT AACTACTTAC AAGAGGAGGG AGATAAACGA CTTGATTTGC GTAATATTAA TCTCAGGCGA GTAGAACTAT TGGGAGCAAA TTTACAACGA GCGGACTTAC GGGGTTGTGA TTTTCGCGGA GCAGATTTGC GGGGTTGTGA TTTCAGTGGA GCAAATCTTG AGGGTGCAGA ACTGGCTGGT TCTATTCTGT TTGAGGCTAA TTTTTTGAAA GCAAATTTGC AAGGTGCAAA CATACAAGGC GCAAATTTGA ATCGTGCGGA ACTTGGTGGT GCAAATTTAC GCGGTGCTAA TCTTATGGGT GCAAGTCTGC GTGCAGCTAA CTTGCCAGGT GCTAATCTTT ATAAAGTCAA TTTGCAACAC GCAATATTGA AATTGGCTAA TCTTTCTGGT GCAAAGCTGT TCTTAGCTAA CCTACAAGGA GCCAAACTTG GTAAGGCTAA CTTATATCTT TGTGGTCTCA TTGGCGCAAA TTTACAGGGT GCAAATCTCA ACGGTGCTAA TCTTGCTGAA GCGAATTTAA ATGCAGCTAA GTTACAACAA ACAGAGATGT TATTTGCTGA CTTCACTGAG GCCAGTTTGA CGGAAGCAGA TTTGTGTAAA GCCAATTTGA TGGGAGCAAA TTTACAAAGA GCCAGCCTCT ATCAAGCCAA TCTTTCTCAG TGCAATCTCG TAGGGGCTAA CCTATCTGAT ACTAACTTTT GTGATGTTAA ATTAGCCGGA GCAATTCTCA CAGGAGTCAA AAATTTAAAA CCTCAACAAG TTAGTATTGC CATAGGCGAT CGCACGACTC GCTTACCTGA TAATGTGGAA ATACCAATAC ATTGGCGACA ATCCAGTTAA
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Protein sequence | MPANKTDKLW RWLIGITVIF AVTIAVILFA SSNPQGLTIQ QKLQSRNQAL TITAIIFLGL GVMINAYYAA KRVDVIIKSA LAAEKNLEIS IQNAKLSEDR LISERLMTAV TQLGHDKIET RTGAIYVLEK VAQDFPQEHW TVIEILTAFI RENASVREEQ EQKEDESQLT PLGRYKQGER RTTQLRLNVH EESPKIRRDI QVALTVVGRR NYLQEEGDKR LDLRNINLRR VELLGANLQR ADLRGCDFRG ADLRGCDFSG ANLEGAELAG SILFEANFLK ANLQGANIQG ANLNRAELGG ANLRGANLMG ASLRAANLPG ANLYKVNLQH AILKLANLSG AKLFLANLQG AKLGKANLYL CGLIGANLQG ANLNGANLAE ANLNAAKLQQ TEMLFADFTE ASLTEADLCK ANLMGANLQR ASLYQANLSQ CNLVGANLSD TNFCDVKLAG AILTGVKNLK PQQVSIAIGD RTTRLPDNVE IPIHWRQSS
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