Gene Ava_4958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4958 
Symbol 
ID3679067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6236307 
End bp6237383 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content43% 
IMG OID637720316 
Productmagnesium-protoporphyrin IX monomethyl ester cyclase 
Protein accessionYP_325450 
Protein GI75911154 
COG category 
COG ID 
TIGRFAM ID[TIGR02029] magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGATT CCCTAAAAAA ACCAGGCTTT GAAGAAATCC GTCCGGGCGT TAAAGTCCCG 
GCAAAAGAAA CTCTATTAAC ACCCCGGTTT TACACCACTG ATTTTGATGA GATGGCACGG
ATGGACATCT CCGTCAATGA AGACGAGTTA CTAGCCATTC TGGAAGAATT CCGGACTGAC
TATAACCGCC ATCACTTTGT TCGGGATGCC GAGTTTGAAA AATCCTGGGA TCACATTGAC
GGGGATACTC GCCGCTTGTT CGTAGAATTT CTCGAACGGT CTTGTACAGC AGAATTCTCC
GGCTTTTTGC TTTACAAAGA ACTCGGTCGC CGTTTGAAAG ATAAAAGCCC AGTTTTGGCA
GAGTGCTTTA ACCTCATGTC ACGGGACGAA GCGCGTCATG CAGGCTTTTT GAACAAAGCG
ATGTCAGACT TTAACCTGTC TCTTGACTTA GGGTTTTTAA CTAAGAGCCG TAACTATACC
TTCTTTAAGC CAAAATTCAT TTTCTACGCT ACCTACCTTT CAGAAAAGAT TGGTTACTGG
CGCTATATCA CCATTTATCG CCACTTGGAA GCACATCCAG AAGACAGAAT TTATCCAATT
TTCCGGTTCT TTGAGAACTG GTGTCAGGAT GAAAACCGTC ACGGAGATTT CTTTGATGCC
ATCATGAAAT CTCAGCCACA AATGTTGAAC GACTGGAAGG CGAAACTGTG GAGTCGTTTC
TTCCTGTTGT CGGTGTTTGC GACGATGTAT CTCAATGATA TTCAACGTAA AGACTTCTAC
GCTTCCATCG GTTTAGATGC ACGAGATTAC GACATCTACG TGATTAAGAA GACCAATGAA
ACCGCAGGTA GAGTATTTCC AGTAATTCTG GATGTGGATA GCCCAGAATT TTACGAACGC
TTAGATATAT GTGTTGAGAA TAGCGAAAAA TTGAGTGCGA TCGCTAGCTC TAATACTCCT
AAGTTCCTGC AATTCTTCCA GAAATTACCA GTATTAGCAT CTACTGGCTG GCAATTATTA
CGCCTGTACT TGATGAAACC AATTGATGCT GTTTCTGCCC AAGGCGCAGC GCGTTAA
 
Protein sequence
MVDSLKKPGF EEIRPGVKVP AKETLLTPRF YTTDFDEMAR MDISVNEDEL LAILEEFRTD 
YNRHHFVRDA EFEKSWDHID GDTRRLFVEF LERSCTAEFS GFLLYKELGR RLKDKSPVLA
ECFNLMSRDE ARHAGFLNKA MSDFNLSLDL GFLTKSRNYT FFKPKFIFYA TYLSEKIGYW
RYITIYRHLE AHPEDRIYPI FRFFENWCQD ENRHGDFFDA IMKSQPQMLN DWKAKLWSRF
FLLSVFATMY LNDIQRKDFY ASIGLDARDY DIYVIKKTNE TAGRVFPVIL DVDSPEFYER
LDICVENSEK LSAIASSNTP KFLQFFQKLP VLASTGWQLL RLYLMKPIDA VSAQGAAR