Gene Ava_4957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4957 
Symbol 
ID3679066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6235379 
End bp6235873 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content45% 
IMG OID637720315 
ProductTM2 
Protein accessionYP_325449 
Protein GI75911153 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTA ATCATCAGCA GAAAGACCGT GTGCTTGTCT CTTACATTTT GAGTGCGGCC 
TGGTTTTTTG GTTTAGGAGG ACTACATCGG CTCTACAACG GCAAAATTGG CACTGGTTTG
TTGTGGCTAT GCACAGGGGG CGTATTTGGC ATCGGGCAGT TTGTGGATTT GTTTCTCATG
CCTGGTATGG TTGACGAATA TGAACAGCAA CTGAGACTAA AAGCTGGTGT GTCTCCCTTA
GGTGTACCCC TAAATCAGCC AATCACTACA TCCCAAACCC AGCGTTTAAC CAAAGACCAA
CTGATAGTCA AATTAATTGA AGCCGCAGAA ACCAAAGGCG GTAGTTTAAC TGTGACTCAA
GGAGTCAAAG CCACGGGAGC CAGCTTTACA GAAGTAGAAG CCACGCTCAA GGAAATGCTG
AAATCAGGTT ACGTCAAAAT AGACAACGAC CCCATTACTG GAGCCGTCAC CTATCACTTT
TATGAACTTA ACTAG
 
Protein sequence
MTVNHQQKDR VLVSYILSAA WFFGLGGLHR LYNGKIGTGL LWLCTGGVFG IGQFVDLFLM 
PGMVDEYEQQ LRLKAGVSPL GVPLNQPITT SQTQRLTKDQ LIVKLIEAAE TKGGSLTVTQ
GVKATGASFT EVEATLKEML KSGYVKIDND PITGAVTYHF YELN