Gene Ava_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4938 
Symbol 
ID3679125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6208912 
End bp6209835 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content42% 
IMG OID637720296 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_325430 
Protein GI75911134 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.35183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.16262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC AACTAGTGTT AATGGATCAT GATGGTGGTG TAGATGATTA TCTAGCAACC 
ATGCTCCTGT TGACGATGGA GCATATTCAA CTCCTGGGTG TTGTCGTTAC TCCTGCTGAT
TGTTATGTCC AGCCTGCGGT GAGTGCTACG CGTAAAATTA TAGATTTGAT GGGATTTTCT
CATATCCCAG TGGCAGAAAG TACTGTACGC GGGATTAATC CTTTTCCTCG GCTGTATCGG
CGTGATTCGT TTATTGTTGA CCATCTGCCT ATTCTCAATC AAAATGAATT GATTCATACA
CCTTTGGTTG AGGAAACTGG TCAAGATTTT ATGATCAGAG TATTGCGAGA AGCGCTGGAA
CCCGTAACAC TAATGGTGAC AGGCCCACTC ACAACAGTTG CAGTTGCTTT AGACAAAGCA
CCAGACATTG AAGCCAAGAT TGACAAGATT GTGTGGATGG GTGGCGCTTT GAATGTTCCC
GGTAATGTGG AAAAAAGTTT AGAGGCTGGA CAAGACGGGT CTGCTGAATG GAATGTTTAT
TGGGATGCAG TTTCAGCTGT ACGAGTATGG CAAAGCGAAA TTAATATAAT TATGTGTCCC
TTAGATTTGA CTAACAATGT ACCAGTAACA TCGGAGTTAG TATACAAAGT GGGGCGACAG
CGCCATTATC CCGTATCTGA TTTAGCTGGA CAATGTTATG CCTTAGTTAT CCCACAAGAT
TATTATTTTT GGGATGTGCT AGCAACGGCT TATTTAGGAC AACCAGAATT TTATCAACTC
CGTGAATGGG AGACAGAAAT TATTACTAGT GGTTTGAGTC AGGGACGGAC TAAAGTTGTC
GCTGGTGGGC GCAGGATTTT AGCTATGGAT AAAGTGGATA AGGATGCTTT TTATGCTTAT
ATTTTGCAGC AGTGGGCAAG GTAA
 
Protein sequence
MTKQLVLMDH DGGVDDYLAT MLLLTMEHIQ LLGVVVTPAD CYVQPAVSAT RKIIDLMGFS 
HIPVAESTVR GINPFPRLYR RDSFIVDHLP ILNQNELIHT PLVEETGQDF MIRVLREALE
PVTLMVTGPL TTVAVALDKA PDIEAKIDKI VWMGGALNVP GNVEKSLEAG QDGSAEWNVY
WDAVSAVRVW QSEINIIMCP LDLTNNVPVT SELVYKVGRQ RHYPVSDLAG QCYALVIPQD
YYFWDVLATA YLGQPEFYQL REWETEIITS GLSQGRTKVV AGGRRILAMD KVDKDAFYAY
ILQQWAR