Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4929 |
Symbol | |
ID | 3679155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 6199978 |
End bp | 6200916 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637720287 |
Product | peptidase M23B |
Protein accession | YP_325421 |
Protein GI | 75911125 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.142258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCA AGATTCCGAA TAGTAATTAT CAACAAAACA AATGCAGTTT TGATATTAGA GGAGATAAAC GCAATCATTT TTTGCCAGGC AATTTATTTA TAGGTTTATG TGCTGCCTTG CCTATTACCT TGGCATTACC GGTAGAAGCT TTGCAAGTAC AGGTAAATCC CAAGAATCCC CGCCTGGGGG ACACAGTTTC TGTAGTGATC AATTTAGATA ATCCAGACAA TACCAATAAC CCAACCGTAT CTGTTGGCGA GAAAACTTAC CCAGCTTTTG AAGTAGCACC CAATAAGTAT CGGGCATTTA TCCCCACGAC ACCCCTAGAA AAGCCAGGCA CTAGAAAAAT TAGAGTATTT GGTGATGGTC AAGTTCAAGA ATTATCTGTA CCAGTAGCTA CTCGTAAGTT CCCTGTACAG CGCATCACTT TACCACCAGG GAAATCTGCT GATGGTGCGA CTGAATACGA ACTCAACCGT GTTGCAGCCT TTAAAGCGTT ACAAACATCA CAAAAGTATT GGAATGGGCC ATTCCTGAGA CCAAATACAG GACGACTCAG CACACTTTAT GGTGTACGTC GCTACTACAA CGGGAAATTT GCCAATGACT ACTACCATCG CGGTCTTGAC TATGCTGGTG CAGCCGGTTC GCGTGTAGTT GCCCCGGCTG CTGGTAAGGT AGCTTTAGTA GGCAGGGTAG CCCAAGGATT TAGAGTTCAT GGTAACGTAG TTGGCATTGA CCACGGCCAA GGAGTTGTCA GTATTTTCAT GCACCTGAGT CGAATTAATG TCAAAGAAGG TGACTTGGTA AAAGCTGGAC AATTAATTGG CGCAGTGGGT TCTACAGGGG CTTCTACCGG GCCGCACCTA CACTGGGGTC TGTATGTTAA CGGTCAGTCT ATTGACCCAA CCTCATGGAA AAACAAAACT TTTGAATAA
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Protein sequence | MITKIPNSNY QQNKCSFDIR GDKRNHFLPG NLFIGLCAAL PITLALPVEA LQVQVNPKNP RLGDTVSVVI NLDNPDNTNN PTVSVGEKTY PAFEVAPNKY RAFIPTTPLE KPGTRKIRVF GDGQVQELSV PVATRKFPVQ RITLPPGKSA DGATEYELNR VAAFKALQTS QKYWNGPFLR PNTGRLSTLY GVRRYYNGKF ANDYYHRGLD YAGAAGSRVV APAAGKVALV GRVAQGFRVH GNVVGIDHGQ GVVSIFMHLS RINVKEGDLV KAGQLIGAVG STGASTGPHL HWGLYVNGQS IDPTSWKNKT FE
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