Gene Ava_4929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4929 
Symbol 
ID3679155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6199978 
End bp6200916 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content44% 
IMG OID637720287 
Productpeptidase M23B 
Protein accessionYP_325421 
Protein GI75911125 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.142258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCA AGATTCCGAA TAGTAATTAT CAACAAAACA AATGCAGTTT TGATATTAGA 
GGAGATAAAC GCAATCATTT TTTGCCAGGC AATTTATTTA TAGGTTTATG TGCTGCCTTG
CCTATTACCT TGGCATTACC GGTAGAAGCT TTGCAAGTAC AGGTAAATCC CAAGAATCCC
CGCCTGGGGG ACACAGTTTC TGTAGTGATC AATTTAGATA ATCCAGACAA TACCAATAAC
CCAACCGTAT CTGTTGGCGA GAAAACTTAC CCAGCTTTTG AAGTAGCACC CAATAAGTAT
CGGGCATTTA TCCCCACGAC ACCCCTAGAA AAGCCAGGCA CTAGAAAAAT TAGAGTATTT
GGTGATGGTC AAGTTCAAGA ATTATCTGTA CCAGTAGCTA CTCGTAAGTT CCCTGTACAG
CGCATCACTT TACCACCAGG GAAATCTGCT GATGGTGCGA CTGAATACGA ACTCAACCGT
GTTGCAGCCT TTAAAGCGTT ACAAACATCA CAAAAGTATT GGAATGGGCC ATTCCTGAGA
CCAAATACAG GACGACTCAG CACACTTTAT GGTGTACGTC GCTACTACAA CGGGAAATTT
GCCAATGACT ACTACCATCG CGGTCTTGAC TATGCTGGTG CAGCCGGTTC GCGTGTAGTT
GCCCCGGCTG CTGGTAAGGT AGCTTTAGTA GGCAGGGTAG CCCAAGGATT TAGAGTTCAT
GGTAACGTAG TTGGCATTGA CCACGGCCAA GGAGTTGTCA GTATTTTCAT GCACCTGAGT
CGAATTAATG TCAAAGAAGG TGACTTGGTA AAAGCTGGAC AATTAATTGG CGCAGTGGGT
TCTACAGGGG CTTCTACCGG GCCGCACCTA CACTGGGGTC TGTATGTTAA CGGTCAGTCT
ATTGACCCAA CCTCATGGAA AAACAAAACT TTTGAATAA
 
Protein sequence
MITKIPNSNY QQNKCSFDIR GDKRNHFLPG NLFIGLCAAL PITLALPVEA LQVQVNPKNP 
RLGDTVSVVI NLDNPDNTNN PTVSVGEKTY PAFEVAPNKY RAFIPTTPLE KPGTRKIRVF
GDGQVQELSV PVATRKFPVQ RITLPPGKSA DGATEYELNR VAAFKALQTS QKYWNGPFLR
PNTGRLSTLY GVRRYYNGKF ANDYYHRGLD YAGAAGSRVV APAAGKVALV GRVAQGFRVH
GNVVGIDHGQ GVVSIFMHLS RINVKEGDLV KAGQLIGAVG STGASTGPHL HWGLYVNGQS
IDPTSWKNKT FE