Gene Ava_4924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4924 
Symbol 
ID3679150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6192272 
End bp6192976 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content35% 
IMG OID637720282 
ProductFHA domain-containing protein 
Protein accessionYP_325416 
Protein GI75911120 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.219389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAG ACCAAGATAG AGGCATAGGA TTCCAGTTAA AAAACCAGGA TATAGAACGG 
CGCTTAAGTT TATATCAGAT ATTTATTTCT CTGTATGAAC AGCATAGTCA TCTTTTGAAT
GATATCCTTC AATTAGACAA TCTATCTCAG TCATCCTGGG CTAATGCAAA ACCTTACTAT
ATACAAGGGG TAATCGATGA ATCAGCTATA TATGTGATTA CCAACTTATG TAATAATCAA
ACACAAACCC TACAGCAACC ACAGTTAACT TGGACGATAG GGCGCGATCG CAATAATGGT
ATTTCCACCT ACGATAAACT GTTGTCTCGT CACCATGCGG CAGTTCAATA TATTGACAAT
CAAGGCTTTT ATTTAATTGA TTTCAATAGT ACAAATGGTT CTTTTGTCAA TGGAGAGCAA
ATATATCAGC CTGTGAGACT TAAAGATGGT GATATTATAC GCTTAGGAAG TTTAACGTTT
AATTTCTTCT TGAATTATAG CCGCCGTCTT CTACCAACAG TAACAACAGA TTTTCTGAAG
CCAACGATAC CTCAAACACA GAACCATCGA AGTGAAAACT CAGAAGATAC CGTACAAATT
TTCATAGGGA CTGATTCTCT AGAAAGTTTA AAATATGAAC ATCAGGATTT AAAGCCTGAG
CATAAATCGG AGATTTTAGA CTGTTTTTTT CAGAGACAGA TATAA
 
Protein sequence
MLKDQDRGIG FQLKNQDIER RLSLYQIFIS LYEQHSHLLN DILQLDNLSQ SSWANAKPYY 
IQGVIDESAI YVITNLCNNQ TQTLQQPQLT WTIGRDRNNG ISTYDKLLSR HHAAVQYIDN
QGFYLIDFNS TNGSFVNGEQ IYQPVRLKDG DIIRLGSLTF NFFLNYSRRL LPTVTTDFLK
PTIPQTQNHR SENSEDTVQI FIGTDSLESL KYEHQDLKPE HKSEILDCFF QRQI