Gene Ava_4923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4923 
Symbol 
ID3679149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6190355 
End bp6191929 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content43% 
IMG OID637720281 
ProductSerine/threonine protein kinase 
Protein accessionYP_325415 
Protein GI75911119 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[S] Function unknown
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0957797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACT GCATTAATCC TACCTGTCCA AATCCAGAAA ATGTAGCATA TAGCCAAAGG 
TGTGAGGCTT GTGGCTCACG GCTACTGTTG CGCGATCGCT ATCGGGTGCT GAAACCATTG
GGTCAGGGTG GCTTCGGTGC AACCTTTTTA GCCCATGATC AAATATTGCC AGGGGAACCA
AGTTGTGTAA TTAAACAATT ACGTCCTTCA GGAACAGCAC CACACGTTTT GCAGATGGCG
CGAGAACTAT TTGAGCGAGA AGCCAAAACC TTAGGCACAA TTGGCAATCA TCCCCAAGTA
CCACGATTGC TAGACTACTT TGAAGAGCAA GAACAATTCT ACCTAGTTCA GGAATATATC
AGTGGTTCCA CTCTTCAACA GGAAGTCAAA CTTAATGGCA CTCTGAGCGA AGCAGGTGTA
AAGCAATTTT TAAGTGAAAT TTTGCCGTTA CTGCAATACA TCCATGAGCA TAAAGTAATT
CACCGTGATA TCAAACCAGC CAACTTAATT CGCCGTTCTC AAGATGCCAG AATGGTATTG
ATTGACTTTG GTGCGGTCAA AAACCAAGTC AGCCAAGCAA TTACAAACCA ATCGGCAAAC
ACAGCACTAA CGGCCTATGC AATTGGCACT CCTGGTTTTG CACCTCCAGA GCAAATGGCA
ATGCGTCCAG TTTATGCCAG CGATATCTAT GCCTTGGGGG TAACGTGTGT ATATCTATTA
ACAGGTAAAA CACCTAAAGA TTTAGATTAC AATCCCACAA CAGGTGAAGT CATGTGGGAA
CATTTGGTAC AAGTAAGTGA CCACCTGATT GGTGTGCTGC GGAAGATGTT GGAAGTATCA
GTACGCAGTC GTTACCAATC AGCCACAGAT GTACTTAAAG CCTTGGAAAT CGAGCCATAT
TTGGAAAGTT TGGCTCAGGG ATTGCTAGTG AAATCAGAGA AAGAGCAAAC ATCCCAACGT
CCAGAAAATT CTGCGGTTTT ATCTAGCAGT TCTCCTGTCG CAGCGACTAG TGTAGGTGGT
GTAGCACAGG TAGCCGCCGC AATTAGAGCC AGAAGAGCTA AAGATGCAGC AGCCAAGCTA
GCCATATTAC CTAATAGCAA CAGTAATGGT AACGGATTGC CAACTCAACA ATCCAAAGCT
GGACGTAGAC TAGATAGCCA AACTTTAATA AAAGCTTATC TTAAAGGGAG ACGCGACTTT
GCTCTTCATA ATTTAAATTT CCTTAATCTC CAAGGAGTTG ACTTATCAGA AACAAATTTT
CATTCAGCTC AGCTACAAAG CACTAATCTC CAAGGAGCAA ACCTTCATAA CAGTGATTTT
GGCAGAGCTA GCCTGACACG CGCCAACCTT AAAGACGCTA ATTTAAGTAA AGCTTATTTC
AATCATGCCG ATTTAGAAGG AGCAGACCTA CGTGGTGCAG ACCTGAGTCA TGCCTATCTC
AGTAATGCTA ATCTTCGTGG CACTAATTTG TGTGGTGCTA ATCTTACAGG TGCAAAAATT
ACTGATGAGC AACTAGCATT GGCGAAAACT AACTGGATGA CGATACGTCC TAATGGTAAA
AGAGGTTTAT TGTAA
 
Protein sequence
MSYCINPTCP NPENVAYSQR CEACGSRLLL RDRYRVLKPL GQGGFGATFL AHDQILPGEP 
SCVIKQLRPS GTAPHVLQMA RELFEREAKT LGTIGNHPQV PRLLDYFEEQ EQFYLVQEYI
SGSTLQQEVK LNGTLSEAGV KQFLSEILPL LQYIHEHKVI HRDIKPANLI RRSQDARMVL
IDFGAVKNQV SQAITNQSAN TALTAYAIGT PGFAPPEQMA MRPVYASDIY ALGVTCVYLL
TGKTPKDLDY NPTTGEVMWE HLVQVSDHLI GVLRKMLEVS VRSRYQSATD VLKALEIEPY
LESLAQGLLV KSEKEQTSQR PENSAVLSSS SPVAATSVGG VAQVAAAIRA RRAKDAAAKL
AILPNSNSNG NGLPTQQSKA GRRLDSQTLI KAYLKGRRDF ALHNLNFLNL QGVDLSETNF
HSAQLQSTNL QGANLHNSDF GRASLTRANL KDANLSKAYF NHADLEGADL RGADLSHAYL
SNANLRGTNL CGANLTGAKI TDEQLALAKT NWMTIRPNGK RGLL