| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4920 |
|---|
| Symbol | |
|---|
| ID | 3679146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 6187815 |
|---|
| End bp | 6189113 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637720278 |
|---|
| Product | glutamate-1-semialdehyde aminotransferase |
|---|
| Protein accession | YP_325412 |
|---|
| Protein GI | 75911116 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0943019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTAAATA CCACTATTAA AACCACAAAA TCACAAGAAA TCTTCGCTGC CGCCCAAAAC
CTGATGCCAG GTGGTGTCAG CTCCCCTGTG CGCGCTTTTA AATCTGTAGG GGGGCAACCC
ATCGTATTTG ATCATGTAAA GGGTGCATAC ATCTGGGATG TAGATGGCAA CCAATACATT
GACTATGTAG GCACTTGGGG GCCTGCCATT TGCGGTCATG CTCATCCAGA TGTCATCGGG
GCGTTGCATG AAGCTTTAGA AAAAGGTACT AGTTTTGGTG CGCCTTCATT CTTGGAAAAT
GTTTTGGCGG AAATGGTCAT CGCTGCTGTT CCCAGCATCG AAATGGTACG ATTCGTCAAC
TCAGGGACAG AAGCTTGTAT GGCTGTATTG CGGCTGATGC GAGCTTTTAC TAACCGGGAG
AAAGTCATCA AGTTTGAAGG CTGTTACCAC GGACACGCTG ATATGTTTCT GGTCAAAGCC
GGCTCTGGTG TAGCCACACT AGGTTTACCC GATTCCCCAG GTGTGCCAAA ATCCGCAACC
AGCAGCACTC TCACAGCCCC ATACAATGAC CTCGAAGCTG TTAAGGCATT ATTTGCAGAA
AACCGCGATC AAATCGCTGG TGTCATTCTC GAACCAGTTG TTGGTAATGC TGGGTTTATT
ACTCCTGATG CCGGCTTTTT GGAAGGACTA CGGGAACTAA CTCACGAACA TGGAGCTTTA
CTCGTGTTTG ATGAAGTGAT GACTGGTTTC CGTATTGCTT ATGGTGGCGC TCAAGAAAAG
TTTGGCGTTA CACCCGATTT GACGACTTTA GGGAAAGTTA TCGGTGGTGG ATTACCCGTG
GGTGCTTATG GTGGTCGTCG GGATATTATG TCAATGATTG CGCCTGCGGG TCCCGTGTAT
CAAGCAGGAA CGCTTTCTGG TAATCCTTTA GCCATGACAG CCGGGATTAA AACTCTGGAG
TTATTGCAAA AGCCCGGTGC TTATGAGTAT CTAGAGCGGA TTACTAAAAA GTTAGCAGAT
GGGTTACTGC AAGTTGCCCA GGAAACAGGT CATGCAGCTT GCGGTGGTCA TATTAGCGCC
ATGTTCGGCT TATTCTTTAC CTCTGGCCCT GTGCATAACT ATGAAGATGC CAAAAATTCT
GACACAGCTA AATTTGGTCG CTTCCATCGC GGTATGTTAG AGCGGGGTGT TTATTTAGCA
CCTTCCCAAT TTGAGGCTGG CTTTACATCT TTAGCTCACA CTGACGAAGA TATTGACCAG
ACAATTGCGA TCGCCCGCGA AGTGCTATCT AGTATCTAA
|
|---|
| Protein sequence | MVNTTIKTTK SQEIFAAAQN LMPGGVSSPV RAFKSVGGQP IVFDHVKGAY IWDVDGNQYI
DYVGTWGPAI CGHAHPDVIG ALHEALEKGT SFGAPSFLEN VLAEMVIAAV PSIEMVRFVN
SGTEACMAVL RLMRAFTNRE KVIKFEGCYH GHADMFLVKA GSGVATLGLP DSPGVPKSAT
SSTLTAPYND LEAVKALFAE NRDQIAGVIL EPVVGNAGFI TPDAGFLEGL RELTHEHGAL
LVFDEVMTGF RIAYGGAQEK FGVTPDLTTL GKVIGGGLPV GAYGGRRDIM SMIAPAGPVY
QAGTLSGNPL AMTAGIKTLE LLQKPGAYEY LERITKKLAD GLLQVAQETG HAACGGHISA
MFGLFFTSGP VHNYEDAKNS DTAKFGRFHR GMLERGVYLA PSQFEAGFTS LAHTDEDIDQ
TIAIAREVLS SI
|
|---|
| |