Gene Ava_4903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4903 
Symbol 
ID3679188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6174291 
End bp6175484 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content42% 
IMG OID637720261 
Productputative ammonia monooxygenase 
Protein accessionYP_325395 
Protein GI75911099 
COG category[R] General function prediction only 
COG ID[COG3180] Putative ammonia monooxygenase 
TIGRFAM ID[TIGR03082] membrane protein AbrB duplication 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.080717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.221223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA GTTTAAGTAT TAGTCCTACC CAGAAGGAAA CCAATAACGC CAGTCCTCTA 
ATCGCCAAAT TGCAGTTAAT TGTCAAGCAG ATTATCGTCC TCACTATAGA AATGCTGCTA
GCATTACCTC TGGGTTGGGC ATTAACAAAA TTGCATTTTG GCGGAATTTC TTGGATATTT
GGGGGAATTG CCGCCGGAAC AGCAGTTCTG CAAGGATGCC GAGTTTTTTA TAACTATTCT
CCCCAGCCTA ATCGCGTCGC CAGAAAAGTA GGAATGGGAC TAGTCGGACT GACGGTTGGT
GCATCAAATG CCAATAGTAA TCTAGTTAGT CTTGTTTCGG GAATTCCTAT ATTTATTTTT
CTCACCTTAT TCTTGCTGTT ATCTGGTATT GGCATTGGCT ATATCTACTC CCGCTTAAGT
AAAACCAACA TATTAACGGC AATGTTGGCT ACAGTTCCTG GCGGTGTAGG TGTCATGTCA
TCGATCGCCG CCGACTATAA TCGTAATGTC ACATTAGTAG CACTAGTACA GGCGATTCGT
GTTACTTCCG TAGTCCTACT CATTCCCTTT ATTGCTAGAA CATCCGTTGG TGGTTATTTG
AATTCATCCA CACTTCCAGT TAAAGGAGTG TTAATCGATT TTGCCGCATC ACAACTGGGA
TTATTGGCAG TTGTGCTGGT ACTCACAGGA ATCATTGTTT ATCTAGCAAT AACATTTAAG
ATTCCGGCCG GAGAGTTTTT TGGTGCATTA GTTCTGGGTG CAACATTCAA CTCTGTGCTA
GATTACTTGC CTTTTGTCAG TCATATTCAC TTCCATCCCC CACTATTGGT GAATATTATC
GGTCAAATGC TCCTGGGAAT AACCATTGGT GAATATTGGG GGGAAAAACC TAATTTTGGT
AAAAAAACCG TAGGTTACGC CTTGATGTCT GTATTCATGA CCTTGGTTGC AGGAGCGATC
GCTGCTACTC TAGCTATGCA GTTATCCTCA TGGGACTGGT TGACTTGTTT ATTAGTCACA
GCGCCAGGCG GATCAGCAGA AATGATACTA GTTTCCTTAA GCTTAAATCA CAATGTGGAA
GTCGTCACAA CAGGCCATTT AGTGAGGCTG ATAGCCATTA ACAGTTCTTT ACCATTGTGG
CTATTTTTAT TCCGTCACTT TGATGGATTA CGGGAAGCTA AAGCGACAAA ATAG
 
Protein sequence
MNQSLSISPT QKETNNASPL IAKLQLIVKQ IIVLTIEMLL ALPLGWALTK LHFGGISWIF 
GGIAAGTAVL QGCRVFYNYS PQPNRVARKV GMGLVGLTVG ASNANSNLVS LVSGIPIFIF
LTLFLLLSGI GIGYIYSRLS KTNILTAMLA TVPGGVGVMS SIAADYNRNV TLVALVQAIR
VTSVVLLIPF IARTSVGGYL NSSTLPVKGV LIDFAASQLG LLAVVLVLTG IIVYLAITFK
IPAGEFFGAL VLGATFNSVL DYLPFVSHIH FHPPLLVNII GQMLLGITIG EYWGEKPNFG
KKTVGYALMS VFMTLVAGAI AATLAMQLSS WDWLTCLLVT APGGSAEMIL VSLSLNHNVE
VVTTGHLVRL IAINSSLPLW LFLFRHFDGL REAKATK