Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4900 |
Symbol | |
ID | 3679185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6168967 |
End bp | 6171975 |
Gene Length | 3009 bp |
Protein Length | 1002 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637720258 |
Product | ATPase, E1-E2 type |
Protein accession | YP_325392 |
Protein GI | 75911096 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000821628 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0255689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCAAG CAATACATAC CAGTGTCAAA GGGAGAGCTA GATATAAGGT AAAAGAACTT TATCATTCCC TATCTCTCAA GGAATATTTG GAGCGATCGC TTGTCAATCA ACCAGAAATA ATTGATGTTT CTGCTAATAT CTCTACAGGT AATGTGCTTG TATTTTTTTC ACCAAAATAT AATTACAAGC AGATTGCCTA TTTGATTGAT GAAGTTATCT TAAATTACCA AAAAAGTAAT CAGCAAGTCC AGCCATTTAC ATCTCACAAA ATTGTTAAGA AAACTCAACG AATAAGTGGT GTTAAGCAAC AAAAGATAGA GAATTGGCAT CTTATGCCGG CAAGTACAGT TGTGGATACC TTCAACACCT CTGCATTAGG GTTATCCAGT GAGTCTGCTG CCGCTAATTT GCGTAAATAT GGGGCGAATG TGCTTTCAGA AACGGAGGTA CGTTCTAGTT TAAGTATCTT GGTTGACCAG TTCAAGTCTT TACCTGTGGC TTTGCTGGGT GTGGCGGCTG GGGTGTCGGT TTTTACTGGA GGGTTGATTG ATGCTGTAGT TATTTTGGGT GTGGTTGGTG TAAATGCGGT GATTGGCTAC GCTACAGAAA CTCAGTCAGA ACGCATCATT CACTCTCTCA AGCATCAAGA ACAAACGTCG GCTTGGGTGA TGCGAGATGG CAAGGCGCAG GAAATTCCTG TAGATAATGT AGTTTTGGGC GATGTTTTAA TTCTCAAACC GGGTAGCTAT GTAGCAGCAG ATGCCAGACT GATTGAGGCA GATAATTTAA GTATTGATGA ATCGGCCTTA ACTGGTGAAA GTCTCCCTGT CAGTAAAAAT ACGGCATCTT TGACAGGTGA GGATGTACCA TTAGGCGATC GCCTAAATAT GATTTATCGG GGGACTTATA TCACCGGGGG TCAAGGATTG GCGGTGGTTG TAGCCACTGG GCAGTTTACG GAAATGGGAC ACATCCAAAC TCTGGTAGGT GCAGCCAATG CTACAGAAAC ACCCCTGGCC AGACAACTAG ACCAGGTGGG GAGTCAATTG GTAGTGATTG GGATGGGTCT TTGTGGTCTG GTGTTTGGGA TGGGGGTGAT GCGGGGATAT GGTTTGGTGC AGATGTTGAA ATCATCCATA TCCTTGGCTG TGGCAGCCGT TCCCGAAGGT TTACCAACAA TTGCCACCAC AACCTTAGCC TTGGGTATCC GTGATATGCG GCGAAACAAA GTCCTTGTCC GTAGTTTGAG TGCGGTGGAG GCTTTGGGTT CTGTGCAGAC AATTTGCCTG GATAAAACCG GGACAATTAC GGAAAATAAA ATGTCGGTGG TGGAAATTCA CACCAACACG CGAGAAATTA AAGTTACAAA TGGGGAGTTC ATCGCTGGGA CAGGAAATAT TAACCCCTAT ATGTATGATG AACTGTTAAA GCTGATTCAT GTCTCGGTTT TGTGTAATGA AAGTGAAGTG AGTCGTGTCG ATGGTGAGTA TGTAGTCACA GGTTCGGCGA CAGAAAACGC CTTAATTTAC ATGGGAATTG CGGCGGGGGT GGATGCGATC GCCATAAAAC AGAAGTATCC TTTACTACAA ACGAATCTAC GTTCCGAAAA CCGCAATATT ATGAGTACCA TCCACGAGAC TCATAACGGA CATAAATTTG TCGCCGTCAA AGGTAGCCCC AGCGAAGTGG TGCAGATGTG CCAAGGGTGG ATGAAGGATG GGGAGGTAGT GCCTTTAACC GATGCAGACC GACAAATGTT GGAAATAGAA AATGATCGTA TGGCGGGTAA AGCTTTGCGG GTGTTGGGTG TAGCCTACAA CCATATAGAT GAATCCCACA ACGGCAACCA TGAAACAGAT TTGATTTGGT TGGGTTTAGT AGGGATGGCA GACCCAATTA GAAGGGGTGC CAAAGCATTA ATTGCCGACT TCCATCACGC CGGCATTGAT ACCGTCATGA TCACAGGTGA TCAAAGTCCC ACAGCTTATG CGATCGCTAA AGAATTAGAA TTGAACCGTG ATACTCAACT AGAAATTCTC GACTCCAGCA ACCTCAACAA TCTCACCCCA GAAGCCTTAA CTGCCCTCAG CGACAAAGTA GATGTATTTG CCCGTATCAG TCCCAGTAAT AAATTGCAAG TAGTCCAAGC TTTGCAAGGT GCAGGTAAAG TCGTCGCCAT GACTGGTGAT GGCATTAACG ATGCCCCCGC CTTAAAAGCT GCCCAAGTTG GTGTGGCAAT GGGTAAAGGG GGAACCGATG TCGCCCGTGA AGTAGCAGAT ATTGTCCTGG AAGACGACAG ACTGGAAACC ATGATTATCG CCGTTAGTCG GGGACGAACG ATATACAACA ACATTCGTAA ATCTGTGCAT TTCCTCCTAG CGACCAACCT CAGCGAAATC ATGGTCATGA CCACCGCCAC CGCCGTAGGT ATTGGCGAAC CCTTGAATGC AATTCAACTA CTCTGGCTGA ACTTAGTTAC AGATATATTC CCTGGCTTAT CCCTAGCGAT GGAAGCCCCA GAACCAGAGG TATTAAGTCA ACCACCCCGC AACCCAGCAG ACCCAATTAT CAAAAAATCC GATTTTGGCA GAATCACCTT TGAGTCCGCC ACCATATCTG CAAGTACCCT AGCCGCATAC GGTTACGGCA TCCTCAAATA TGGTATTAGT CCCCAAGCCA GTACCATCGC CTTCATGGGT TTAACCACAG CCCAACTACT ACATACAATT AGTAGCCGTT CCGAAAAACA CAGCATATTT AGTCCAGAAA AACTCCCACA TAACCCTTAT CTCACGGCGG CGGTTACAGG TTCCTTTGGG CTGCAACTAT TAGCTGTAGC CGTCCCACCC CTGAGAACTT TATTAAAGAT TACCCCAATT AATCTGGTTG ATGGTGCGGT AATTGGTGGT AGTGCCTTAC TACCCCTGAT TGTGAACGAA GCAACCAAAA ATACTGGCGC AAGCAAGATA AAAAAATATC CAAAATGTAG GGTGCGTCAG TATAAATAA
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Protein sequence | MIQAIHTSVK GRARYKVKEL YHSLSLKEYL ERSLVNQPEI IDVSANISTG NVLVFFSPKY NYKQIAYLID EVILNYQKSN QQVQPFTSHK IVKKTQRISG VKQQKIENWH LMPASTVVDT FNTSALGLSS ESAAANLRKY GANVLSETEV RSSLSILVDQ FKSLPVALLG VAAGVSVFTG GLIDAVVILG VVGVNAVIGY ATETQSERII HSLKHQEQTS AWVMRDGKAQ EIPVDNVVLG DVLILKPGSY VAADARLIEA DNLSIDESAL TGESLPVSKN TASLTGEDVP LGDRLNMIYR GTYITGGQGL AVVVATGQFT EMGHIQTLVG AANATETPLA RQLDQVGSQL VVIGMGLCGL VFGMGVMRGY GLVQMLKSSI SLAVAAVPEG LPTIATTTLA LGIRDMRRNK VLVRSLSAVE ALGSVQTICL DKTGTITENK MSVVEIHTNT REIKVTNGEF IAGTGNINPY MYDELLKLIH VSVLCNESEV SRVDGEYVVT GSATENALIY MGIAAGVDAI AIKQKYPLLQ TNLRSENRNI MSTIHETHNG HKFVAVKGSP SEVVQMCQGW MKDGEVVPLT DADRQMLEIE NDRMAGKALR VLGVAYNHID ESHNGNHETD LIWLGLVGMA DPIRRGAKAL IADFHHAGID TVMITGDQSP TAYAIAKELE LNRDTQLEIL DSSNLNNLTP EALTALSDKV DVFARISPSN KLQVVQALQG AGKVVAMTGD GINDAPALKA AQVGVAMGKG GTDVAREVAD IVLEDDRLET MIIAVSRGRT IYNNIRKSVH FLLATNLSEI MVMTTATAVG IGEPLNAIQL LWLNLVTDIF PGLSLAMEAP EPEVLSQPPR NPADPIIKKS DFGRITFESA TISASTLAAY GYGILKYGIS PQASTIAFMG LTTAQLLHTI SSRSEKHSIF SPEKLPHNPY LTAAVTGSFG LQLLAVAVPP LRTLLKITPI NLVDGAVIGG SALLPLIVNE ATKNTGASKI KKYPKCRVRQ YK
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