| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4886 |
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| Symbol | ksgA |
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| ID | 3679210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 6153128 |
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| End bp | 6153943 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637720244 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_325378 |
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| Protein GI | 75911082 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00215913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00477797 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTACGAC CGCGCAGGGT ATTTGCTCAG CATTGGCTCA AAAGTGAGAA GGCACTCGAC
GCAATTGTCA AGGCAGCAGA GTGTAGTACA AATGACCGCA TCCTAGAAAT CGGCCCCGGT
ACAGGTATTC TGACTCGGCG TTTATTACCA TTGGTAGAAG CTTTACTAGC AGTAGAAATT
GACCGCGATT TATGTAAATT GTTAGTAAAA CAACTAGGAC AAAAAGAAAA TTTTCTATTA
TTACAAGGAG ATTTTCTCAC ACTAGATTTA GTTGCAAACT TACTAACATT TCCTAAATTT
CAAAAGCCAA ATAAAGTAGT TGCTAATATT CCCTACAACA TTACTGGGCC GATAATAGAA
AAACTATTGG GAACAATTGC TAACCCTAAC CCTGAACCAT TTGACTCCAT AGTATTGCTC
ATTCAAAAAG AAGTAGCCGA AAGGTTATAT GCTAAAGCTG GGTCAAGAAC CTTTGGAGCA
TTATCGGTCA GGGTACAATA TTTAGCTGAT TGTGAATTTA TTTGTGATGT CCCTGCGGGT
GCATTTCATC CACCACCAAA AGTAGATTCC GCAGTTGTCA GATTGCGTCC TCGACAAATA
CAGATTCCTG CTCGTGATCC AAAACGACTA GAGAATTTGG TAAAGTTAGG ATTCGGCGCG
AAACGTAAAA TGCTACGCAA TAATTTGCAA TCAGTAGTAG ACCGCGATCG CCTGAGCCAA
TTACTGGAAC AATTAAACAT AAACCCCCAA GCCAGAGCTG AAGACATCAG CACTCAGCAA
TGGGTAGAAT TAGCCAACTT ATTGGGAGTA GAGTAA
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| Protein sequence | MVRPRRVFAQ HWLKSEKALD AIVKAAECST NDRILEIGPG TGILTRRLLP LVEALLAVEI
DRDLCKLLVK QLGQKENFLL LQGDFLTLDL VANLLTFPKF QKPNKVVANI PYNITGPIIE
KLLGTIANPN PEPFDSIVLL IQKEVAERLY AKAGSRTFGA LSVRVQYLAD CEFICDVPAG
AFHPPPKVDS AVVRLRPRQI QIPARDPKRL ENLVKLGFGA KRKMLRNNLQ SVVDRDRLSQ
LLEQLNINPQ ARAEDISTQQ WVELANLLGV E
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