Gene Ava_4882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4882 
Symbol 
ID3679206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6146798 
End bp6147085 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content43% 
IMG OID637720240 
Producthelix-turn-helix protein, CopG 
Protein accessionYP_325374 
Protein GI75911078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0995678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000387838 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAATAATC AGAAAAAAAC TAGCCGTTTC GATGATTTAA TTGATGCAGC CCTTAGCCGT 
CAACAGCGAG ACCAACCACA GTCAACACCA AATAAACCGA CTTCCCAAAG CAAAAGCACT
GACCCGGCTT ATACCCGGAC AACGATTTAT TTACCGAAGC AAGTACATCG CCAACTTAAA
GCAGCAGCAG CTTCTCAAGA ACGACAAATG AGCGATATTG TGACGGAACT TATTGAACAG
TGGCTAGAGA AGAAGCAGGG GGAAGAACTC ATAACTGATG ACCAATAA
 
Protein sequence
MNNQKKTSRF DDLIDAALSR QQRDQPQSTP NKPTSQSKST DPAYTRTTIY LPKQVHRQLK 
AAAASQERQM SDIVTELIEQ WLEKKQGEEL ITDDQ