| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4880 |
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| Symbol | |
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| ID | 3679204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6143637 |
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| End bp | 6145304 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637720238 |
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| Product | Beta-lactamase-like |
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| Protein accession | YP_325372 |
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| Protein GI | 75911076 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.419128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000027158 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGAATA ATTTGTCCAC ATATTCCAAT ATTGAGACAG GGGAAGCAGC AACCGAACTA
GAATGTTTTC CCTACAGTGT TCAGCACAAT GATGAAGGTG TATGTTTATT AGTGCGGATG
GGGCCGCATC GAATTCTGTT GGATTGTGGT TTAGCAGACA TTTCTTCTAT CCAAAAGAGT
GTAACTCCAT CAGCAAAGCG GGGTAATCCA CCTTTACCAG CAGATTTAGT TTTAGTTACC
CATGCCCACC CAGATCACGC TAGAGGTTTA CTAGCACTGC ATCAAGCTTT TCCTAATTTA
CCTATCTATG GTAGCGAGGT AACCAGCAAG TTGCTGCCTT TGAATTGGTT AGACCGCAAC
CCCCAGGAAA TTCCCCAACT GTGTCACGCC TTACCGTTGC GATCGCCTGT AGAACTACAA
GACGGGTTAG TTGCCGAAAT CTTCCCCGCC GGACACTTAC CAGGCGCAGT GGCAATTCTC
CTCACATACA CCACAGAACA TCGCTCATAC AAATTACTCT ATACAGGGGA TTTCTTTTTA
TCTAACTCTC GCTTAGTTGA AGGTTTGCGG TTAGAAGAAC TGCGCGGTAT AGACTTAAAT
GTGTTGATTA TTGAAGGGAC TTACGGCACA TCCAGACACC CCCACCGCCG CAACCAAGAA
AACCAACTAG CCGAGAGAAT TAATCGCGCC ATTAGCGATC GCTGTTCTGT TATCCTCCCC
ACCCCCGCTT TAGGCTTAGG ACAAGAACTG TTGATGTTGC TGCGTTCTCA TCACCACTTC
ACCGGCAGAG ATTTAGATAT TTGGGTGGAT GGCGCTGTTG CTATTGGCTG TGATGCTTAC
TTGGAACTGC TACCACACCT ACCAGCATCA GTCCAAAACT TCGCCCGCCA TCAACCCTTA
TTTTGGGATG AGCGAGTGCG TCCCCGCGTG CGCCGCTTGC AACCAGAAAA CCGCAGCATA
GTAGGTAAAT CGCCTTGTAT TGTCCTAACA GATTCCACAT CTGATTTAGA ACAGTACTGT
CAACCAGAAA CCGGGCCTTG GCTCATCTTA TTGCCAGAAA AAATTGATAT AAAAGTTAAT
AAAAAATACT CAGCCCCCAC CACAGTAGAA AGTTATCTCC TAGCTCAACA CAGTGATGGG
CCGGGAACTA CCCAATTAAT TCATAATTTA CGTCCCCAGC ACGTCGTTTT TGTTCACGGT
TCCCCTGCCT ACCTAGCAGA TTTGACCTGT TTAGAAGAAT TGCAGAACCG TTATCACATC
CATTCACCGG CGGCTGAGAC AATGGTAGAA CTGCTTATCG GCGAAACATT TTTACAACCA
GCCCCCCCAG AAACAAATTA TGAAGGTGAA CTGACAGAGT TAGGAACAGT CATCACCATC
AGCATCCCCG AAGCCATTAC CGCCGATCCC CGGTGGCGAC AGTTCGCCGA TACTGGTTTA
ATTGAAGCCC GTTGGCAGGG GGAAGAACTG GTATTACGGG GATTAACCCA AAGAGAACTC
CTCAATCAAA ATAGCGATCG CTACATCTCC CCCGAAATTA ATTGCTGCGG CACTTGTCGC
CATCAACGAG GACAACGCTG CTGGAACCCC TCCTCTCCCC TATACAACTT TAGAGTGACT
CTAGAGGGTC ACTGTCCCGC TTTTGAGCGA TTAGCGAATG GTGAATAG
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| Protein sequence | MRNNLSTYSN IETGEAATEL ECFPYSVQHN DEGVCLLVRM GPHRILLDCG LADISSIQKS
VTPSAKRGNP PLPADLVLVT HAHPDHARGL LALHQAFPNL PIYGSEVTSK LLPLNWLDRN
PQEIPQLCHA LPLRSPVELQ DGLVAEIFPA GHLPGAVAIL LTYTTEHRSY KLLYTGDFFL
SNSRLVEGLR LEELRGIDLN VLIIEGTYGT SRHPHRRNQE NQLAERINRA ISDRCSVILP
TPALGLGQEL LMLLRSHHHF TGRDLDIWVD GAVAIGCDAY LELLPHLPAS VQNFARHQPL
FWDERVRPRV RRLQPENRSI VGKSPCIVLT DSTSDLEQYC QPETGPWLIL LPEKIDIKVN
KKYSAPTTVE SYLLAQHSDG PGTTQLIHNL RPQHVVFVHG SPAYLADLTC LEELQNRYHI
HSPAAETMVE LLIGETFLQP APPETNYEGE LTELGTVITI SIPEAITADP RWRQFADTGL
IEARWQGEEL VLRGLTQREL LNQNSDRYIS PEINCCGTCR HQRGQRCWNP SSPLYNFRVT
LEGHCPAFER LANGE
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