Gene Ava_4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4876 
Symbol 
ID3679200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6141108 
End bp6141899 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID637720234 
Producthypothetical protein 
Protein accessionYP_325368 
Protein GI75911072 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.276153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000161362 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTG CGGATTTAAT TACTTGGTTT GAATCTTGGG CGAATCCGGC TTGGTGTGAA 
AGTTGGGATA ACTGCGGCTG GCAAATTGAA CCTGGAATAC TGCATGAAGA AGCTAGAGTT
TTGGTTTGCC TAACACCAAC TTTGGCGGTA ATGGAGGAAG CGATCGCACT CCAAGCCAAT
CTGATTTTTG CCCATCATCC CTTGATTTTC AGCCCTCCCA AGTCTCTCCG TCGTGGTGAA
GCGATCGCGG ATATGGCAAG GTTAGCTTTT ACCAAAAATA TCGGTATCTA CAGCGCGCAC
ACCAATTTTG ACCAAGTAGA AGATGGTACG GCCGATGTTT TAGCACAGAT TTTGGGACTC
AAGGATGTTG CTCCCATAGT CCCGACGCAA GGGGGATTAG GTTATGGGCG TGTTGGTTTG
CTAGATCCGT TCTTAAATTT ACAAGAGTTA TTAACTGTCA TTCAAACCCG CCTGGCTCCT
CCTGATTTAA TTTTTTCCCC CACTGCGGAT TTACAGCAGA TAATTTCACG GGTGGCTGTG
TTGGGTGGTT CGGGTGCGAG TTTTATCTCG GCGGTAGCCA AAACCGGTGC GGAAGCTTAT
CTAACTTCTG ACTGCAAATT CCATCAGTTT CAAGAAAGCC GCGATCGCGG TTTAATTCTC
ATCGATGCTG GACACTATGC CACTGAACGC CCGGCTTGCG ATCGCTTAGT AGAAAAATTT
CGGTCTTTAA ATCTACATTG GGTGCAATTG AGCAACCAAG ATGAGGATTT TCGCCAGTTT
TTCGTGAAAT AG
 
Protein sequence
MKIADLITWF ESWANPAWCE SWDNCGWQIE PGILHEEARV LVCLTPTLAV MEEAIALQAN 
LIFAHHPLIF SPPKSLRRGE AIADMARLAF TKNIGIYSAH TNFDQVEDGT ADVLAQILGL
KDVAPIVPTQ GGLGYGRVGL LDPFLNLQEL LTVIQTRLAP PDLIFSPTAD LQQIISRVAV
LGGSGASFIS AVAKTGAEAY LTSDCKFHQF QESRDRGLIL IDAGHYATER PACDRLVEKF
RSLNLHWVQL SNQDEDFRQF FVK